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GT18227

CSHL Arabidopsis genetrap mutant lines

Original: GT18227

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18227

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 344527 [Map]; Strand: c
      • AT5G01890.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT18227 - 5-prime edge 
    CTTTCTCCGA TCCGACATTC ACGACGACGT TTTGGGTCTC ATCGTTTTCA 
    AGGCCGGACT CGACGACCCT CTCTCTAAGC TCTCTTCATG TCACTCGACA 
    AACTACGATC CCTGCAACTG GGTCGGTTGC ACATGCGACC CTGCCACCAA 
    TCGGGTCTCG GAGCTCCGCC TTGACGCCTT CTCTCTCTCC GGTCACATCG 
    GCCGTGGCCT TCTCCGTCTC CAGTTCCTCC ACAGCTTGGT CCTCTCCAAC 
    AACAACCTCA CCGGAACCCT AAACCCCGAG TTCCCTCACC TCGGCAGCCT 
    CCAAGTCGTC GATTTCAGTG GCAATAATCT CTCGGGTCGG ATCCCAGACG 
    GGTTCTTCGA GCAATGCGGG TCCTTGAGGT CCGTTTCCTT GGCTAACAAC 
    AAACTCACAG GTTCTATTCC TGTCTCCCTC AGCTACTGTT CTACTCTCAC 
    CCATCTTAAC CTCTCAAGCA ATCAACTCTC TGGGAGGTTG CCCCGAGATA 
    TCTGGTTCCT CAAGAGCTTA AAGTCCCTTC ATAT

AT5G01890.1

Model type
Protein coding
Short Description
Leucine-rich receptor-like protein kinase family protein
Computational Description
Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G56370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR