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GT18246

CSHL Arabidopsis genetrap mutant lines

Original: GT18246

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18246

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1074990 [Map]; Strand: w
      • AT4G02450.1 - [+] show detail - HSP20-like chaperones superfamily protein
        Distance: 0; Region: intron2 (CDS)
      • AT4G02450.2 - [+] show detail - HSP20-like chaperones superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT18246 - 5-prime edge 
    GTCCCAATGT TGATTTTGCT TTCCTGAATG GAAAAAAAGT TACAGATTTA 
    AAACAAAACA GGTAACAAAT GAATCAATAA GACCAAGTCA GTCTACAAAT 
    TCTCACCTCA ACATTGACTT TATCGGCAAG TTCCAGTTTG AGCTCATAAA 
    CGTGGTTTTC TGGACCAACT TTCGCAGAGA AATCAAAGAC TCCTTCTGGG 
    TCTAGGTTAA CCTTGGTATC CTTAGTATCA GCTAATACTA CAGTGAGAAA 
    AATCTTCTCG GTAGTCTCAG CCCACT

AT4G02450.1

Model type
Protein coding
Short Description
HSP20-like chaperones superfamily protein
Computational Description
HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT3G03773.1); Has 51861 Blast hits to 12232 proteins in 1049 species: Archae - 75; Bacteria - 28612; Metazoa - 10233; Fungi - 1929; Plants - 4069; Viruses - 438; Other Eukaryotes - 6505 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G02450.2

Model type
Protein coding
Short Description
HSP20-like chaperones superfamily protein
Computational Description
HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT3G03773.1); Has 981 Blast hits to 954 proteins in 256 species: Archae - 7; Bacteria - 144; Metazoa - 401; Fungi - 86; Plants - 167; Viruses - 20; Other Eukaryotes - 156 (source: NCBI BLink).
Link
InterPro Scan - TAIR