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GT18247

CSHL Arabidopsis genetrap mutant lines

Original: GT18247

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18247

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 10490669 [Map]; Strand: w
      • AT2G24660.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT18247 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTACA 
    CTCTAGACAG GGGGAGCTCT GCTGTTTTGT CTGCAAATAA AAACACAGAC 
    CCTAAACCGA ATTCTGTTAC TAAACCGGAC GATTTTGCTG CACCAGAATC 
    TGTTACTAAA CCGGACGATT TTGCTGAACC AGAATCTGTT ACTAAACCGG 
    ACGATTTTGC TGAACCAGAA TCTGTTACTA AACCGGACGA TTTTGCTGAA 
    CCAGAATCTG TTACTAAACC GGACGATTTC GCTGAACCAG ATTCTGTTAT 
    TAAACCGGAC GATTTCACTG AATCAAATTC TGCTCTTCAA ACCGACTCTG 
    TTTTCGAACC AGACTCTGAT TCCGACGTGG CACCTGCTTC TATTGCTTCC 
    GATTTACAAA ATTCACGAGT TGATTCATCT GATTCATCGA CGCCGGATAA 
    GAATCTTGCT TCTGGTGATA CTTTGGCTCA AATTGATGAT TCTCCTGATA 
    TTGTCTCAAC TCCTAATCGT AATAATCAGC CATTGTTCGT TGTTGACAGT 
    CCGTTTGTTG A

AT2G24660.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 1.7e-166 P-value blast match to GB:BAA78424 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)gi|4996363|dbj|BAA78424.1| polyprotein (AtRE2) (Arabidopsis thaliana) (Ty1_Copia-element)
Link
InterPro Scan - TAIR