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GT18253

CSHL Arabidopsis genetrap mutant lines

Original: GT18253

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18253

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 37208 [Map]; Strand: w
      • AT4G00100.1 - [+] show detail - ribosomal protein S13A
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT18253 - 5-prime edge 
    TCCTACTTTC TCCCTGAGTG TGAGATCTGC CACCATGGGT CGTATGCACA 
    GTCGAGGGTT TGTTCTTCTT CTTCGTCTTC TTCGTATTTT AGTTACGTCA 
    ATTGTGAAAT CTAACATATC GCTATCATTT ATGTAGAAAG GGTATTTCAG 
    CCTCTGCGTT GCCTTACAAG AGATCGTCTC CGAGCTGGCT CAAGACCACC 
    TCTCAGGATG TAAGTTCATC TCACTCGA

AT4G00100.1

Model type
Protein coding
Short Description
ribosomal protein S13A
Curator Summary
Encodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development
Computational Description
ribosomal protein S13A (RPS13A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, trichome morphogenesis, leaf morphogenesis, cytokinesis by cell plate formation; LOCATED IN: cytosolic small ribosomal subunit, nucleolus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13/S15, N-terminal (InterPro:IPR012606), Ribosomal protein S15 (InterPro:IPR000589), S15/NS1, RNA-binding (InterPro:IPR009068); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S15 (TAIR:AT3G60770.1); Has 1100 Blast hits to 1100 proteins in 416 species: Archae - 259; Bacteria - 0; Metazoa - 343; Fungi - 146; Plants - 139; Viruses - 0; Other Eukaryotes - 213 (source: NCBI BLink).
Link
InterPro Scan - TAIR