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GT18262

CSHL Arabidopsis genetrap mutant lines

Original: GT18262

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT18262

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 314684 [Map]; Strand: w
      • AT4G00750.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT18262 - 5-prime edge 
    TTTCCTCCTA CTTTCTCCCT GCCCGTCATA CAGCCCCTGA CCTTCCTCCG 
    ACGATAACGG ACGCGCGTGT TGTTCAAATC CCGTCGTGCG GCGTTGAATT 
    CTCGGAGTAC ACGCCCTGCG AGTTCGTGAA TCGGTCTTTG AATTTCCCAA 
    GAGAGAGGCT TATATACAGA GAGAGACACT GTCCGGAAAA ACACGAGTTA 
    GTCAGGTGTC GGATTCCAGC GCCGTACGGT TACAGTTTAC CTTTTCGGTG 
    GCCGGAGAGC CGTGACGTGG CGTGGTTTGC TAACGTGCCG CATACGGAAC 
    TAACGGTGGA GAAGAAGAAT CAGAACTGGG TAAGGTATGA GAAGGATAGG 
    TTTTTATTTC CTGGTGGTGG TACGATGTTT CCACGTGGAG CTGATGCTTA 
    CATCGACGAG ATCGGACGGT TGATAAATCT CAAAGATGGA TCAATTCGGA 
    CAGCCATTGA TACTGGATGT GGGGTAAGTT AAGACT

AT4G00750.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G45750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR