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Mutant Lines
GT18277

GT18277

CSHL Arabidopsis genetrap mutant lines

Original: GT18277

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18277

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 5; Position: 10377126 [Map]; Strand: w
- AT5G28460.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
  Distance: 0; Region: exon1 (CDS)
Chromosome: 3; Position: 22769075 [Map]; Strand: c
- AT3G61520.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
  Distance: 0; Region: exon1 (CDS)

GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTACATCAGA 
ACCTGAGAGA CGCTCCATTA GAATCTCCAT TGTGATCTGA TTTGGTTCAC 
AAGACTGTTC GACCATCTCA TCCATCAGTT TAAGTAATGT CTCTCCTTGG 
GTTTTCTCGT TAAGACACTT AAACAAGGCA TTGTAAGTTT CAACATTAGG 
TCTCACCATC TTCATCTTCA TTTCCTCCTA CAAAGAGAGC GCTTGCCCGA 
AATTCCCCAG CTTAGAAAAT GCGTTTATGA GAATGTTGTA TATTACAGTG 
TTCGGATTGA CCTTTGAGTG CAAACCCATG TCCTTAAAGA GCTTCAATGC 
TTCGTCTAAT TCGCCGACTG AGCAATAAGC GTCAATCACC GCTCCATATG 
TCGTGACAGT CGGGTCTAAC CCGTCTTCTC TCATCTGCTC CATCATTCTC 
TCAACACTCT CGAAGTCCTT GTGTTTACCG AAAAACGAAA TCAGAGTGTT 
GTAAGTGATG GAATCAGGTT TCTTCCCTTC TTTTTCCATA TCGGT

5 prime edge [+] show sequence

Chromosome: 3; Position: 22769017 [Map]; Strand: c
- AT3G61520.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
  Distance: 0; Region: exon1 (CDS)

CCTACTTTCT CCCTGTTCTG ATGAGTTAGT TAAGCTGAGG AAGTTTATGC 
AAGGCTACTC TGTTGCTTCG CTGACCGAGA AAGCTTCACC TTTCGATGTC 
TTTAGCTTGG GATAATGTTC GTTTAGATAC AGTAACCATT ACTATAATGT 
TTTTAATAAT TTCTTGATTA TGCATTTTAT ATAATTACAC AATCGCTATT 
TATTTATGTA TGGTTATTTG CTAAATTTTG TTAAAATAAA AAATCCAGCT 
TTCTACAATT CTCAATGCAG TAACTTAAGT AAGCCCATTT ACTTATGGGC 
CTCGTGTATT TGAGGTCCCC GAGACTTGGA CAGACACGTG TCTCGAATTG 
AAT

AT3G61520.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G28460.1); Has 51879 Blast hits to 14395 proteins in 309 species: Archae - 5; Bacteria - 71; Metazoa - 859; Fungi - 887; Plants - 48189; Viruses - 0; Other Eukaryotes - 1868 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G28460.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G61520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR