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Mutant Lines
GT18287

GT18287

CSHL Arabidopsis genetrap mutant lines

Original: GT18287

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18287

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 2; Position: 7389226 [Map]; Strand: c
- AT2G17000.1 - [+] show detail - Mechanosensitive ion channel family protein
  Distance: 0; Region: intron5 (CDS)

AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTACA 
TACATCATCT CTATAATTAC CTTGAATCAG GGTTTTGTGA CCAGGCAGGT 
GGAACTCTGC TCGAGACAAC TGTTGGCATG GTTTTAACAT TGATATCAAG 
TGGATGAAAC CGGTATTGAA TGTCGAGTTC GAGGAGGATT TTGATTACTT 
CCTCGATCAA CAACGCTCTT CTTGTAAATC TCTCTCCCAT GTTTTGATGG 
TTAATTTTAT GACATAGCCA TATTGCTATC CTCACAATGT TCAAATCTTC 
CACATCCTTA ACAATGATAT CAGCTTTTGG ATACCAATAC TCTGGCTTGT 
TGTCGATGTA ACTGCGGTTT TCGCGAAAAA AAACGATCGT TATCATCCTG 
TCATAATATA TAAACTTAAG ACACTAGGAC AAGTGCATGA TTGTTTACCT 
TGATATTCTC TGTTTGATTG CAGCAATCTT TTCAGGAGGA GTAGTAATGT 
GGACACAGCA TGTGACTTCA TCTCCCATAT CCGGACTACG GTTGTAATTG 
TGGATTGCTT TCTGCCACAG AAGAATATTT GGATACACAA TCTTCAGATT 
GTCAGCTCTC AG

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 908188 [Map]; Strand: c
  - AT3G03680.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: GT18287 - 5-prime edge
```
AGGCTTCTTT GCCTTAGTAT CCGGTGGCGC ATCGGGTTTT TTCTCGACCG 
GATTAGCTTC TTCCTTTGGT TTCTCCTCT
```

AT2G17000.1

Model type: Protein coding
Short Description: Mechanosensitive ion channel family protein
Computational Description: Mechanosensitive ion channel family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: embryo, sepal, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: mechanosensitive channel of small conductance-like 6 (TAIR:AT1G78610.1); Has 1986 Blast hits to 1976 proteins in 685 species: Archae - 66; Bacteria - 1304; Metazoa - 0; Fungi - 206; Plants - 211; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G03680.1

Model type: Protein coding
Short Description: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT1G74720.1); Has 14333 Blast hits to 8916 proteins in 1075 species: Archae - 59; Bacteria - 2640; Metazoa - 3947; Fungi - 1236; Plants - 1682; Viruses - 124; Other Eukaryotes - 4645 (source: NCBI BLink).
Link: InterPro Scan - TAIR