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GT18315

CSHL Arabidopsis genetrap mutant lines

Original: GT18315

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18315

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2076881 [Map]; Strand: c
      • AT1G06760.1 - [+] show detail - winged-helix DNA-binding transcription factor family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT18315 - 3-prime edge 
    AATGAAACGG TAGAGGATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    ATTCGCATCA ACAGCTTTCC TCTTAGTTGC AGCAGCAGTG GCACGAGGAA 
    CGGGCTTAGC CTTAGCCTTC GCGGTCACTT TCTTAGCAGC AGCAGTCTTA 
    GGTTTAACGG CGATTGTTTT CTTAGCCTTG GAAGCCGCAG CGACCTTTCT 
    CTTCGCCTTG GTAACCGCCA CAGTCGCCGG TTTCTTTTNN NAAGGAGAAG 
    ATTTCTCCGC TGCCGCCTTA GGGGATGATG CTTTAGCCGA CGCCGATGGG 
    AGTTTAAACG AGGCTTTGAC CTTCACAAGC TTCCCAGAAG CAACGAGTCT 
    CTTCAGATTG AGAAGCAACA GCTTTCTGAA TGTTGGAGGA AGCTCCTTAC 
    GCTTCTCCTC GATGAACTTC TGAATCGCGT ATTGGCTAGA TCCAGTTCTC 
    TCTTTCAACG TAACAATCGC ATCCTTAATC ATCTGAAATC GCATCAACAA 
    AGAACACAAA AATCAATTTC TAAATTCCAA AATCAGAATC CGGCTTAATA 
    AGAAACACGA ATAAACGAAA TCGAATCTCA TTTTTACCTC TTCGTAAGTA 
    GGATGAGATG AAACAGTTCT CTTCTTCGGA GCGGCAGCAA CAGTCTTCTC 
    CCTCCTTCAC TTCCTTAACA TTCTTCGTCT TTCGCC

AT1G06760.1

Model type
Protein coding
Short Description
winged-helix DNA-binding transcription factor family protein
Computational Description
winged-helix DNA-binding transcription factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Histone H5 (InterPro:IPR005819), Histone H1/H5 (InterPro:IPR005818); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT2G30620.1); Has 20265 Blast hits to 10904 proteins in 1494 species: Archae - 37; Bacteria - 8386; Metazoa - 4718; Fungi - 1128; Plants - 980; Viruses - 120; Other Eukaryotes - 4896 (source: NCBI BLink).
Link
InterPro Scan - TAIR