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GT18341

CSHL Arabidopsis genetrap mutant lines

Original: GT18341

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18341

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 304992 [Map]; Strand: w
      • AT5G01780.1 - [+] show detail - 2-oxoglutarate-dependent dioxygenase family protein
        Distance: -807; Region: promoter
      • AT5G01780.2 - [+] show detail - 2-oxoglutarate-dependent dioxygenase family protein
        Distance: -804; Region: promoter
      • AT5G01790.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: GT18341 - 3-prime edge 
    ATTTGGAAAA TAAAACGTTG AAATTTTATA AAATGTTTTT CATATATTAG 
    TTTATTTTGT GTTCCATCGT CTTATTATTA TAATATTTAA TCAGTTTGTG 
    TCGGTAATGC AACTCCGAAT CATATAATAC GTTTACCTTT TTGTTAAATA 
    AGAGCAATGA ACAGTTACAA GAGTTACGTA AATTGATCAG AAGATTATTA 
    TAGTAACTGT CGCATTCACT TTGGTTTAAA GTGCATGACT AAAACTTCGA 
    TAATTTAAGT ATAGCTTTTG GCAAGTGTGT CTTTTTGTAT ATGGATGGTT 
    CCGTGTAAAA ATGTAACTGT GAGTTTGAAC AAGCCTTCTT TGGTGTTAAT 
    TTAGCTGTCT TCCAAGCAAA GGAAATTAAT GAATGGGGTT TGGTGGTTGG 
    TTTCTTCTTA ATTGATTTTT TGTCGAATAT GATTGGTTTT CTACAACCTC 
    CTCACACTCG AAATAGCAGA ATCATTTGGT CCATTTTTAA AAGATAAAAT 
    CTACACATCT TTCTTTCTTC TATATTACCT GGTAGGTTTT AGAGTCAAGA 
    TTTTAATTTA CCTTTTTCTT GTTAGATGTA ACAATACGTT TGAATACTGA 
    CATAAACTAA GATTTGAC

AT5G01780.1

Model type
Protein coding
Short Description
2-oxoglutarate-dependent dioxygenase family protein
Computational Description
2-oxoglutarate-dependent dioxygenase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate-dependent dioxygenase family protein (TAIR:AT3G14160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G01780.2

Model type
Protein coding
Short Description
2-oxoglutarate-dependent dioxygenase family protein
Computational Description
2-oxoglutarate-dependent dioxygenase family protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: 2-oxoglutarate-dependent dioxygenase family protein (TAIR:AT3G14160.1).
Link
InterPro Scan - TAIR

AT5G01790.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR