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GT18346

CSHL Arabidopsis genetrap mutant lines

Original: GT18346

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18346

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 7389325 [Map]; Strand: w
      • AT2G17000.1 - [+] show detail - Mechanosensitive ion channel family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: GT18346 - 5-prime edge 
    GGTTTTGTGA CCAGGTAAGT GGAACTCTGC TCGAGACAAC TGTTGGTATG 
    GTTTTAACAT TGATATCAAG TGGATGAAAC CGGTATTGAA TGTTGAGTTC 
    GTGGAGGATT TCGATTACTT CCTCGATCAA CAACGCTCTT C

AT2G17000.1

Model type
Protein coding
Short Description
Mechanosensitive ion channel family protein
Computational Description
Mechanosensitive ion channel family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: embryo, sepal, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: mechanosensitive channel of small conductance-like 6 (TAIR:AT1G78610.1); Has 1986 Blast hits to 1976 proteins in 685 species: Archae - 66; Bacteria - 1304; Metazoa - 0; Fungi - 206; Plants - 211; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink).
Link
InterPro Scan - TAIR