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GT18361

CSHL Arabidopsis genetrap mutant lines

Original: GT18361

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18361

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 892530 [Map]; Strand: w
      • AT2G03030.1 - [+] show detail - Toll-Interleukin-Resistance (TIR) domain family protein
        Distance: 2010; Region: intergenic
      • AT2G03040.1 - [+] show detail - emp24/gp25L/p24 family/GOLD family protein
        Distance: 293; Region: intergenic
    Flanking Genome Sequence: GT18361 - 5-prime edge 
    GCAGAAAGAA GCATGTCACA TCTTATGTAT GATCAAATGA GGAATCTTGA 
    GGAAGTTGGA TTTTGTTTTT TTATTGTAAT ATAATGTTTG TGGTACAGGG 
    GAAACGGAGA ATGGTGATAT AAGACCTTAA TTAATTGATT AATCTTGCAA 
    CATTTAGAGA AAATTAATGT TTGAGGAATT AAAATCGAAA CATACTCAAG 
    AGAAGTCATA AGAATGAAAG ATGAGATATA TAGAGAGCCA AATGAACCTT 
    TTTTGCATAA TGGATTATCA AACTCACAAA ATGTATGGTT TAAGCTTAAC 
    TTTTTGTTAA AGTCGGGCAT AAAGACAATT GTGTTGGTGA AAAAACAGTT 
    TTTTCTCTCG CCATAGACGA TTTCTCCAAA GCCACCGGTT CACAGAAAAA 
    CCGATGTCAA TTCCAAATCA GACTTGG

AT2G03030.1

Model type
Protein coding
Short Description
Toll-Interleukin-Resistance (TIR) domain family protein
Computational Description
Toll-Interleukin-Resistance (TIR) domain family protein; FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: signal transduction, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Toll-Interleukin-Resistance (TIR) domain family protein (TAIR:AT2G03300.1); Has 1604 Blast hits to 1539 proteins in 51 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 1599; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G03040.1

Model type
Protein coding
Short Description
emp24/gp25L/p24 family/GOLD family protein
Computational Description
emp24/gp25L/p24 family/GOLD family protein; INVOLVED IN: transport; LOCATED IN: integral to membrane; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT2G03290.1); Has 637 Blast hits to 637 proteins in 130 species: Archae - 0; Bacteria - 0; Metazoa - 362; Fungi - 29; Plants - 206; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).
Link
InterPro Scan - TAIR