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GT18387

CSHL Arabidopsis genetrap mutant lines

Original: GT18387

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18387

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 3626615 [Map]; Strand: c
      • AT2G08986.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 155; Region: intergenic
      • AT2G09187.1 - [+] show detail - transposable element gene
        Distance: 12988; Region: intergenic
    Flanking Genome Sequence: GT18387 - 5-prime edge 
    CTTTCTCCCT GATACACATG ACATCAAGTC ATATTCGACT CCAAAACACT 
    AACCAACCTA CTTCTTGCTT CTTAAAGCTT TCATCGTGTA GCCAAAGTCT 
    ATATGAGTCT TTGTCTTTGT GTCTTCTAAC AAGGATACAA TTCTTACGCC 
    TTTAAGATCC GGTTGCGGTT TAAGTTCTTA TACTCAATCA TACACATGAC 
    ATCAAGTCAT ATTCGACTCC AAAACACTAA CCAACCTTCT TATTGCTTCT 
    CAAAGCTTTC ATGGTGTAGC CAAAGTCCAT ATGAGTCTTT GGCTTTGTGT 
    CTTCTAACAA GGATACACTA CTTAAACTTT TAAGATCGAG TTGCGGTTTA 
    AGTTGTTATA CTCAATCATA CACATGACAA CAAGTCATAT TCGACTCCAA 
    AACACAACCA ACCTTCTCTT CGCTCGACAA AGNTTTCATG GTGTAGCCAA 
    AGTTCATATG AGTCTTTGGC TTTGTGTCTT CTAACAAGGA AACACTACTT 
    AGGCTTTTAA GATCGAGTTG CGCTTTAAGT TGTTATACTC AATCATACAC 
    ATGACAACAA GTCATATTCG ACTCCAAAAC ACTAACCAAC CTTCTTCTTG 
    CTTCTCAAAG CATTCATGGT GTATCCAAAG TCTATATGAG TCTTTGTCTT 
    TGTGTCTTCT AACAAGGATA CAATTCTTAC GCCTTTAAGA TCCGGTTGCG 
    GTTTAAGTTC TTATACTCAA TCATACACAT G

AT2G08986.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G40104.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G09187.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family (Athila), has a 2.3e-226 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)
Link
InterPro Scan - TAIR