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GT18398

CSHL Arabidopsis genetrap mutant lines

Original: GT18398

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18398

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17910470 [Map]; Strand: w
      • AT3G48360.1 - [+] show detail - BTB and TAZ domain protein 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT18398 - 3-prime edge 
    ACTACCAAAC CTACAGAAAT CTCTCTTCTT CTTCTTCTCT AC

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17910659 [Map]; Strand: w
      • AT3G48360.1 - [+] show detail - BTB and TAZ domain protein 2
        Distance: -134; Region: promoter
    Flanking Genome Sequence: GT18398 - 5-prime edge 
    ACCTTTTGGT TGCTTACGTG GCGTCTCGCA AATATCTATT TTATTTTTGC 
    GTCTCTCTAT TCATCTCACT CGACCACGGG ATCTGTTTTC ACTTAGATTA 
    TCACTCTTTT TTTTCTTTAT T

AT3G48360.1

Model type
Protein coding
Short Description
BTB and TAZ domain protein 2
Curator Summary
encodes a protein (BT2) that is an essential component of the TAC1-mediated telomerase activation pathway. Acts redundantly with BT3 and BT1 during female gametophyte development and with BT3 during male gametophyte development. BT2 also mediates multiple responses to nutrients, stresses, and hormones.
Computational Description
BTB and TAZ domain protein 2 (BT2); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 1 (TAIR:AT5G63160.1); Has 1199 Blast hits to 1199 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 703; Fungi - 0; Plants - 445; Viruses - 2; Other Eukaryotes - 49 (source: NCBI BLink).
Link
InterPro Scan - TAIR