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GT18424

CSHL Arabidopsis genetrap mutant lines

Original: GT18424

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18424

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16713793 [Map]; Strand: c
      • AT4G35110.2 - [+] show detail - Arabidopsis phospholipase-like protein (PEARLI 4) family
        Distance: 0; Region: intron2 (CDS)
      • AT4G35110.1 - [+] show detail - Arabidopsis phospholipase-like protein (PEARLI 4) family
        Distance: 0; Region: intron2 (CDS)
      • AT4G35110.3 - [+] show detail - Arabidopsis phospholipase-like protein (PEARLI 4) family
        Distance: 0; Region: intron2 (CDS)
      • AT4G35110.4 - [+] show detail - Arabidopsis phospholipase-like protein (PEARLI 4) family
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT18424 - 3-prime edge 
    ACCGTTACCG ACCGTTTTCA TCCCTAGCTA AGAAGCCTTG AACCTGTAAC 
    ATAACAGAAC AAGAATCAGA ATCCATAAAG GAAAAGTTTT TAAAATGGCA 
    AAATCAAAAG CAGAAAAAAG TACTTTGCTT CTTAGTGTTC ATCTCACTCG 
    ACC

AT4G35110.1

Model type
Protein coding
Short Description
Arabidopsis phospholipase-like protein (PEARLI 4) family
Computational Description
Arabidopsis phospholipase-like protein (PEARLI 4) family; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: Arabidopsis phospholipase-like protein (PEARLI 4) family (TAIR:AT2G16900.1); Has 682 Blast hits to 587 proteins in 127 species: Archae - 27; Bacteria - 57; Metazoa - 143; Fungi - 39; Plants - 275; Viruses - 32; Other Eukaryotes - 109 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G35110.2

Model type
Protein coding
Short Description
Arabidopsis phospholipase-like protein (PEARLI 4) family
Computational Description
Arabidopsis phospholipase-like protein (PEARLI 4) family; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: Arabidopsis phospholipase-like protein (PEARLI 4) family (TAIR:AT2G16900.1); Has 682 Blast hits to 587 proteins in 127 species: Archae - 27; Bacteria - 57; Metazoa - 143; Fungi - 39; Plants - 275; Viruses - 32; Other Eukaryotes - 109 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G35110.3

Model type
Protein coding
Short Description
Arabidopsis phospholipase-like protein (PEARLI 4) family
Computational Description
Arabidopsis phospholipase-like protein (PEARLI 4) family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: Arabidopsis phospholipase-like protein (PEARLI 4) family (TAIR:AT2G16900.1); Has 679 Blast hits to 588 proteins in 127 species: Archae - 27; Bacteria - 57; Metazoa - 141; Fungi - 40; Plants - 275; Viruses - 32; Other Eukaryotes - 107 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G35110.4

Model type
Protein coding
Short Description
Arabidopsis phospholipase-like protein (PEARLI 4) family
Computational Description
Arabidopsis phospholipase-like protein (PEARLI 4) family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: Arabidopsis phospholipase-like protein (PEARLI 4) family (TAIR:AT2G16900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR