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GT18438

CSHL Arabidopsis genetrap mutant lines

Original: GT18438

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18438

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1590427 [Map]; Strand: c
      • AT3G05490.1 - [+] show detail - ralf-like 22
        Distance: -850; Region: promoter
    Flanking Genome Sequence: GT18438 - 5-prime edge 
    GTGATTTACA ATTTCATGTA TAATCAAATG TTCATCTAAA GATATATTAT 
    TTTGTTAATT AGTCAACTAC TATCCAATTT TGTGCACATT CATATATTTG 
    GCAAATATGC AAACTTGCTC TAGTAGGTGA AAAGCAAACT TAAAGACATG 
    TAAACCACTA TCCAAACATG GTTACTAATC TATACACTCC ATTCATGGGA 
    AGCACTATTT CTGCGTTGAC AATTTATTTA GATAGAATGA TGTCCGTGAA 
    ATAAGATTAA TTTGACTATC CACATATATA ATTTAGAAAC GATAATCCAT 
    GTGTGTTTGA GTGTTTCAAC GTTTATGTAT GCATAAAGTT AATTTAGAGA 
    CCATTAGATG ATCGATTCTT ATTGCGAAAT AGTATTTCAT CTCACTCGA

AT3G05490.1

Model type
Protein coding
Short Description
ralf-like 22
Curator Summary
Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
Computational Description
ralf-like 22 (RALFL22); CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801); BEST Arabidopsis thaliana protein match is: ralf-like 33 (TAIR:AT4G15800.1); Has 266 Blast hits to 266 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 264; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR