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GT18481

CSHL Arabidopsis genetrap mutant lines

Original: GT18481

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18481

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30354394 [Map]; Strand: w
      • AT1G80770.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: -721; Region: promoter
      • AT1G80770.2 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: -721; Region: promoter
    Flanking Genome Sequence: GT18481 - 3-prime edge
    ATGAAACGGT AGAGGTTTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    ATCTTAGGAT GAGTATCAAA CTCCTGATGA GTTGTGAATA GCTTTAGAAA
    ATAGTCACTG TTTTTCTTTA TAAATTTTAA GCATGCACGA TAACCTGTTT
    CAAATAATTA TGACCTGCCA CATTATGATT TCATACAGCA TTTCGTATAG
    ACTAATACTA TACATTATTC AAAACTATGA TTCAAACAAA TGAAACTCCA
    ATCTATACAA AACTTATACA CATCGTTAGA TATTTTGTGC ATACATTTAT
    ATACAGAAGA GTTAAAAACT TTATGTATAT TACAAATAAA TGATATGCTA
    ATTTAAAACA TCATGTCAAA TTATGGTTAC CCAACCCACA AAAGAATGAA
    AAACCAAAAG GAAAGAAGAC AAAATAAGAC TCAACGAACA CAGTGAACGG
    AGCCAGCTAT TATTTATGAT AATGATATAC TTGTAAAACT AATTAAGAAG
    AAAATGGAAT AAAGTTGTAT CAATTCATGG TTAGCCACGA TTAGTGAGGG
    ACAAAATAAT TTGGACCGGA CTTTTGACAA TTTTATTCGA CCCTACAACA
    TTTCTATTTA CACCCCCTCC CCTCTACTCT TAGATACATC CCCTTCAAAA
    TCATTATCAT TTCTTTTACA TTTATTTGTT TTCCTCTTTA CTTTTTTTTT
    TTTTTTT

AT1G80770.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
pigment defective 318 (PDE318); FUNCTIONS IN: ferrous iron transmembrane transporter activity, GTP binding; INVOLVED IN: ferrous iron transport; LOCATED IN: integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), Nucleolar GTP-binding 1 (InterPro:IPR010674), Ferrous iron transport protein B, N-terminal (InterPro:IPR011619); BEST Arabidopsis thaliana protein match is: Nucleolar GTP-binding protein (TAIR:AT1G10300.1); Has 11067 Blast hits to 11052 proteins in 2859 species: Archae - 320; Bacteria - 7505; Metazoa - 379; Fungi - 348; Plants - 242; Viruses - 0; Other Eukaryotes - 2273 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80770.2

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
pigment defective 318 (PDE318); FUNCTIONS IN: GTP binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), Nucleolar GTP-binding 1 (InterPro:IPR010674); BEST Arabidopsis thaliana protein match is: Nucleolar GTP-binding protein (TAIR:AT1G10300.1).
Link
InterPro Scan - TAIR