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GT18488

CSHL Arabidopsis genetrap mutant lines

Original: GT18488

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18488

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14012579 [Map]; Strand: c
      • AT2G33010.1 - [+] show detail - Ubiquitin-associated (UBA) protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: GT18488 - 3-prime edge
    TTTACCGACC GTTACCGACC GTTTTCATCC CTACCGATTA TACTTAGTAT 
    GAGTCTCTCT GCCTTCTTTC AAGATCTCTG AACATCCTTA TCTGAATCTT
    TCTTTTCTCC GCCATACACC TACTTGTACA GTTTGACGAA CATTGACCCG
    ACTGATTTCA CCGTAGCTAA TCTTCCAATG GCATCGTCTC AAGTGGATGT
    AACTTTCCTT CTCTTCCTCT GCACTATTTA CTATAGTCTT GCTACTTTCT
    CGAATTGTGT TAGCTTGAAA GCTTAGCTTA AAACAGAACC TGTAAAGGAA
    AAATAGGGAT CTTAGTTTTA CATTAGGAGT TAGCAACCTA GATATATCTC
    TCTTGATGGT CTTTCTTTGG ATGTGGCCTT TTTTGTTGTT GAGGAAGATT
    TAAGCACGGA GACATTTCTT GATCCTCAGG CCATCCAAGG CTGGACAAGT
    GTGGGGCATG AAGCTGCACC GACTACAATT ACACTAACTA TCTACTTGGA
    CGATGGTGGG TCTGTGACAC CGGTATATAT TCCTTTTAGA TCAGACCAAA
    CCGTCAGAGA CATCCGCAAT GCCATTGACG AGCTAACACC AGCTAACAAC
    AGATATTACG ATTTGCGCTC AGTGGGTGGA GAAGATGATT GCAGGGATAT
    GAATGCAACT GTAGGCAAAA TTTGTAAGAG TGGTTCTACA ACTCTCCACC
    AGGTCTTCCA CAACACTTAG CTTTGGATTT TTACAGTTTC CATTGATTGA
    TGATGAAACA GATAAGAAAG ACTGAGAGAT GTATATGATT TTCGAAAGGA
    TTCTTGCCTT
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14012249 [Map]; Strand: c
      • AT2G33010.1 - [+] show detail - Ubiquitin-associated (UBA) protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT18488 - 5-prime edge
    AGCTCTGGCT GAATCTGCAG CTCATTCGAA ATCGGACAAG AATTCATCAC 
    CAGTGGCCTC TCTGTTGGTG ACTCCCACTC TGGTACCGCG GATATCTCAT
    TCACCGAAAC CACTGGCGAA GATCTAACCT TGAGGGTAGG CAAGTTTTTG
    CTGCGGCAAG CCTCTATCGC TGAAGCCAAA TCACCATCGA AGGATTCAAG
    GTAATAGACT GCTTCACCTC GAGACACACC AGTTTCAGTG CAGATTCTAT
    CAATATTGTT TGGCGGTGGG TGGTCTTCCA AGTTTTGAGC AGAACTGCTA
    CTTCCCTGAA TCTGAATGTA GAAAATGCAA ACAGTTAAAA CATAGGAGAA
    AGATTGAGTC TGAAATCAAC TCTCGTTTTC TCTAAAGTTC CTTCATCATC
    AAACACAAAG CTTCTATGTG C
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14012511 [Map]; Strand: c
      • AT2G33010.1 - [+] show detail - Ubiquitin-associated (UBA) protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT18488 - 5-prime edge
    CCTACTTTCT CCCTGATAAT CAGGAAGTCA CCTAGAAAAA GAGCTCCCCG 
    AAGCCTGAAA CTGTGATTGT GAAGGTAGTC CTATCAATGG AAGAGGCGGG
    TTGGATGTTA CATCCTCTGT GAAATATGCC TCATTCATGA AATAGTCGAT
    GGCAACTTGT AAACTCCATT GGCAACGCTC GAGGTAAGCG ACTGCGACAT
    CTGGATGCAA TCCAACAATC TCACAGAATT GTTTGATGAT TTCCTCTTTG
    TTTAGCGGTA GTTGCTCTGG CTGAATCTGC AGCTCATTCG AAATCGGACA
    AGAATTCATC ACCAGTGGCC TCTCTGTTGG TGACTCCCAC TCTGGTACCG
    CGGATATCTC ATTCACCGAA ACCACTGGCG AAGATCTAAC CTTGAGGGTA
    GGCAAGTTTT TGCTGCGGCA AGCCTCTATC GCTGAAGCCA AATCACCATC
    GAAGGATTCA AGGTAATAGA CTGCTTCACC TCGAGACACA CCAGTTTCAG
    TGCAGATTCT ATCAATATTG TTTGGCGGTG GGTGGTCTTC CAAGTTTTGA
    GCAGAACTGC TACTTCCCTG AATCTGAATG TAGAAAATGC AAACAGTTAA
    AACATAGGAG AAAGATTGAG TCTGAAATCA ACTCTCGTTT TCTCTAAAGT
    TCCTTCATCA TCAAACACAA AGCTTCTATG TGCATCAATC AACATAGAGT
    TAGTTCCCTT CTTTGTAAAG ACTATCTTAA GGAAACAGAG CAAACCAGAA
    GAAAGATATA GTGCAGAGAA AGAGAAGATT AGTACCTGAA CTTGAGACGA
    TGAAGACATT ATAGGTATAT CGTCTAAA

AT2G33010.1

Model type
Protein coding
Short Description
Ubiquitin-associated (UBA) protein
Computational Description
Ubiquitin-associated (UBA) protein; CONTAINS InterPro DOMAIN/s: UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-associated (UBA)/TS-N domain-containing protein-related (TAIR:AT2G33000.1); Has 31 Blast hits to 21 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 1; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR