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Mutant Lines
GT18490

GT18490

CSHL Arabidopsis genetrap mutant lines

Original: GT18490

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18490

Determination of insertion point(s)

3 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: GT18490 - 3-prime edge
```
TGGAGAAGAA GCTGCTTGGT CAAAAGAGAG
```

3 prime edge [+] show sequence

Chromosome: 2; Position: 19568852 [Map]; Strand: w
- AT2G47760.2 - [+] show detail - asparagine-linked glycosylation 3
  Distance: -587; Region: promoter
- AT2G47760.3 - [+] show detail - asparagine-linked glycosylation 3
  Distance: -587; Region: promoter
- AT2G47760.1 - [+] show detail - asparagine-linked glycosylation 3
  Distance: -587; Region: promoter
- AT2G47770.1 - [+] show detail - TSPO(outer membrane tryptophan-rich sensory protein)-related
  Distance: 0; Region: exon1 (CDS)

GAGGAAGTAC GTGGCGAAGA GCGTCACGAG CACAGGAGCC GCAACCGCTA 
CCGTCAGAGA CTTGAGACCA CGTTTCGCCA TCGCCCTCTT TTGATCGCGT 
TTTCCTTTGT TGTCGTCAGC GCTTTTCATC NTCAGTCGAC CACATAGGTG 
TCGGTGCAGC GTCTCTGTCG TCCCCGCCGC GGTATCTGAT GTCCTGAGAA 
TCCATTACAC ACGTCCAACA CAGACTCGAG GGAACAAGAT TACTGAGATT 
TGAGATGTTG GATATATGGA GAAGAATCTG CTTGGTCAAA AGAGAGTATA 
CTCGGGAGAT GATATTAATA GAGAAGAAGA CGCAGAGAGG CCAGGGCTCT 
TGAGATGGAG AGACACGTGG CGAGAGATAT GCACACCTCA AGCGCTAAAT 
AAGTGTTTTG TGTTTATAGA TAACTTTGAG AAAAAGTGTG CACACGCGCT 
TACTCTATAT GCTCGTGTCA GATGCATACA CACAGTTTTG ACACGAGCGC 
GACGCTTATA TATATATCGC TTAACACTTG TGCATTATTA AAAAAT

5 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: GT18490 - 5-prime edge
```
CGCGGGAGAT CTGTTCCCGC TATGCGATGA TGTTTGAAGA GCCTGACTCA 
TATG
```

AT2G47760.1

Model type: Protein coding
Short Description: asparagine-linked glycosylation 3
Computational Description: asparagine-linked glycosylation 3 (ALG3); CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG3 (InterPro:IPR007873); Has 381 Blast hits to 338 proteins in 173 species: Archae - 2; Bacteria - 2; Metazoa - 149; Fungi - 152; Plants - 35; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47760.2

Model type: Protein coding
Short Description: asparagine-linked glycosylation 3
Computational Description: asparagine-linked glycosylation 3 (ALG3); CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG3 (InterPro:IPR007873); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47760.3

Model type: Protein coding
Short Description: asparagine-linked glycosylation 3
Computational Description: asparagine-linked glycosylation 3 (ALG3); CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG3 (InterPro:IPR007873); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47770.1

Model type: Protein coding
Short Description: TSPO(outer membrane tryptophan-rich sensory protein)-related
Curator Summary: Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks.
Computational Description: TSPO(outer membrane tryptophan-rich sensory protein)-related (TSPO); CONTAINS InterPro DOMAIN/s: TspO/MBR-related protein (InterPro:IPR004307); Has 567 Blast hits to 567 proteins in 188 species: Archae - 24; Bacteria - 226; Metazoa - 151; Fungi - 6; Plants - 53; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink).
Link: InterPro Scan - TAIR