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GT18498

CSHL Arabidopsis genetrap mutant lines

Original: GT18498

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18498

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28568359 [Map]; Strand: c
      • AT1G76135.1 - [+] show detail - MIR394B; miRNA
        Distance: -449; Region: promoter
    Flanking Genome Sequence: GT18498 - 5-prime edge
    CCTTGCTCGA GAGGTGGGAT TTTGCTGGAT GGGTTTAATC AGATGAGAGG 
    AGAGATCAAA GTTTAAGATT CGGATTTGAA AAGACATAAG ATCTAACAAC
    TATGAACAGC AAAACAGTGA AGAAAGAAGA TTGGAAAAAC GTGGAAGAAA
    CAATGAAAAA TAGAAACTGA AAGAGTTTTT TCTCGGGAAA ACAAGTAAAT
    AACAGGAATT AAAAGGGCAA CGCAATC

AT1G76135.1

Model type
miRNA
Short Description
MIR394B; miRNA
Curator Summary
Encodes a microRNA that targets one member of the F-box family. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage.Mature sequence: UUGGCAUUCUGUCCACCUCC. It targets F-box protein AT1g27340.
Link
InterPro Scan - TAIR