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GT18509

CSHL Arabidopsis genetrap mutant lines

Original: GT18509

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18509

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24215649 [Map]; Strand: w
      • AT5G60140.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -196; Region: promoter
    Flanking Genome Sequence: GT18509 - 5-prime edge
    ATAATTCGTT AAGCGGACCA AGGTATCGCT AAGGCCCAAA CAAAAAACAA 
    GAAATGGGCC TTAAGTTTGG TTCAATCTAT ATCGTGTAAA TGACATTATC
    GTCCTTAAAC AAAAGAACCA CAGTAAAGAG TCGAGAAGGG TATATTAGAG
    AAAGAAGGAC TTGTGACATC TCAATTCTTG AACAAGAAAC TTGAAACTTG
    AAAGAAGAAT GAGATAGTGT TAAGTGGCAG AGTTCCAAGT ATCTTAGTAT
    TATTCTCCTC CTATGCCAAT GCTTTTCTTA TGATCACATA GAGAGTAATA
    ACATTCTTTT TACATGAACT CGCAGGTTTT AAACAGCCCT GATGTGTGAA
    CCATTCATAA TGATTTCTCC CAAAATCTAT AGCTCTAGTA TACATTATTA
    TTGTAAGACT GTGTTGATCG TCTTTTGCAC TTCATGTTTC AGACAAACAA
    ACAAAATCAA GAAGTGTATA GAAAGCATCA ACATCGATTA TTTTCCGAGA
    AAACCAATAA GATTCATAAA ACCAAGTACT CTACTCATAT AAAAACTCTC
    AAGTAAAAAT AGATAATGTC TTGGAGTTAA CGCATAAAGC CTTATCAAGA
    GATCATCCTC TTATAACAT

AT5G60140.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60130.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR