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GT18513

CSHL Arabidopsis genetrap mutant lines

Original: GT18513

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18513

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT18513 - 5-prime edge 
    AACCCACATT AATAAACGTA TT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 275517 [Map]; Strand: c
      • AT2G01610.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily protein
        Distance: -697; Region: promoter
    Flanking Genome Sequence: GT18513 - 5-prime edge 
    GGAATCTCCC ATGTTTTGTG GCTCCTATTA GAATATTAAG GTTTTTGTTG 
    TCACCTTAGA TTACAAGTTT CTATCCACCA TCTAGTTTAA ACATCTAATA 
    CGCAATTATA AAATTTCGAA GTTAATTATA TAAACATTCA TTGTTTTGTA 
    TAATATATAC TATTGACCAT GTGATGCAAT ATCAATTTTG ATTTTTAATT 
    GGTTGTAGTT AATTTGTTCA CAAGATTGTT CGACACGAGT AGCTGGTTTA 
    GTCTTAATGT TTCTTTTTCT CCATCTTTAG ATACATTATG GCTATGAATG 
    GTGACATACG CCGCACCCAA AATCGCATCG CAACAGTGCT GTAACAGTAT 
    CAAAATCTTT ACATATACAT ATGTATCTAT GTATTTTTGT TACTATTTGA 
    ACCGCACCGC AAAATGAAAA ATACATTTGA ACTAGTGTAT TTATTTGGAA 
    TGATCTTAAG GATAGAACCA AAGATATACT TTCCTCCTAT CAAAAAAGTA 
    TGTAGTTCCA TAACGACATG GCTCATCGTA ATGTGAAACT ATATAGGTCT 
    TACTCTTTTA CTATTACTAT TTTGACTATA GATTATAACC GAAAACATAA 
    TATCCGTGAT TTCACACATA TCAGACAAAA TGATTAGTGG CAATCTAGCA 
    AATCCAAATA ATAAGGATGG GTAAAAATGT AACATGAGAA CGACCCATCC 
    CTATAAGGCC TACATAAACC GCCAATCACT CC

AT2G01610.1

Model type
Protein coding
Short Description
Plant invertase/pectin methylesterase inhibitor superfamily protein
Computational Description
Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G14890.1); Has 850 Blast hits to 843 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 850; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR