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GT18558

CSHL Arabidopsis genetrap mutant lines

Original: GT18558

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18558

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 19573370 [Map]; Strand: c
      • AT5G48300.1 - [+] show detail - ADP glucose pyrophosphorylase 1
        Distance: 566; Region: intergenic
      • AT5G48310.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 1410; Region: intergenic
    Flanking Genome Sequence: GT18558 - 3-prime edge
    CCTCCTAAGA TTGAGTCTGA TTTTAGTGAG TCGGTTGCCG TCAGAGATTA 
    CTCCTTCAAA CCGAGGTTTG GGAAGATTTT TTTGAAGAAT GTTCTACGGT
    GAAATATGAG TTTGACCTC

AT5G48300.1

Model type
Protein coding
Short Description
ADP glucose pyrophosphorylase 1
Curator Summary
Encodes the small subunit of ADP-glucose pyrophosphorylase. The small subunit is the catalytic isoform responsible for ADP-glucose pyrophosphorylase activity. The presence of the small subunit is required for large subunit stability. Two isoforms of the small subunit (ApS1 and ApS2) have been described. ApS1 is the major small subunit isoform present in all plant tissues tested.
Computational Description
ADP glucose pyrophosphorylase 1 (ADG1); FUNCTIONS IN: glucose-1-phosphate adenylyltransferase activity; INVOLVED IN: photoperiodism, flowering, starch biosynthetic process; LOCATED IN: heterotetrameric ADPG pyrophosphorylase complex, apoplast, chloroplast, chloroplast stroma; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP glucose pyrophosphorylase large subunit 1 (TAIR:AT5G19220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G48310.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24610.1).
Link
InterPro Scan - TAIR