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GT18565

CSHL Arabidopsis genetrap mutant lines

Original: GT18565

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18565

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3070443 [Map]; Strand: c
      • AT1G09510.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT18565 - 3-prime edge 
    AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGGG 
    ATGTTGCCCT CGCTCATATC AAAGCGTTCG AGACTCCTTC AGCCAACGGT 
    AGATATATTA TTGAGGGTCC GGTTGTGACG ATAAATGACA TTGAGAAGAT 
    TTTGCGTGAA TTCTTTCCTG ACTTGAATCT CGGTAACAAG TAAGTTCAAC 
    ATTCCTTCAC ATTTGATTTA CAATCAGATA GACTCTGAAA TACTTCATAC 
    AAAATAAAAA CTTTTTTGAT TTTGCTTTTA AGGGGTGAAG CAAGTGAGAT 
    CATTCCAGTG ATATACAAGC TATGTGTTGA GAAAGTGAAG AGTTTGGGAA 
    TTGAGTTCAC TCCCACAGAA GCAACCCTTA GAGACACTAT TCTTAGCCTC 
    AAAGAGAAAT GTCTTGTGTG ATCATCCTAT CTTGTTATTG CTTTCCTGTC 
    CTTTACAATT GTACTATTGA ACTATGCATT TCATAAAATA AAAGTAGTCT 
    TGTTCTTTAT TTTCAAAACG TAGATTTTAA TTAGTTAAAT TGACAGAGGA 
    AATAACATTT TCAATCTCTA TTATGAACAA GAATCACATC ACAACTTGGA 
    CGATCACCGG TAACTAAAAC CATCACCAGG CTATGTTACA CAGTGTGGCT 
    TTTGTAAAGA CACAGAAACA TATGATTTAT TTTAAAAAAA CACTTCACAG 
    TTCCAAAGAT TCCTACACAT AGTAAACGAT CGAAAAACAT GAACAAACCA 
    AAAAAGGATA ACTTACAATC TACATTGAGA TCGAATCAGA ATCAGTTTCT 
    TTCATCAGAA GCGAAATGCT TGAAG

AT1G09510.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Curator Summary
similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity, cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09500.1); Has 11399 Blast hits to 11383 proteins in 1876 species: Archae - 216; Bacteria - 4771; Metazoa - 368; Fungi - 952; Plants - 2526; Viruses - 56; Other Eukaryotes - 2510 (source: NCBI BLink).
Link
InterPro Scan - TAIR