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GT18585

CSHL Arabidopsis genetrap mutant lines

Original: GT18585

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18585

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4025143 [Map]; Strand: c
      • AT3G12670.1 - [+] show detail - CTP synthase family protein
        Distance: -875; Region: promoter
      • AT3G12680.1 - [+] show detail - floral homeotic protein (HUA1)
        Distance: 0; Region: exon12 (3UTR)
    Flanking Genome Sequence: GT18585 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTACTCA ACGATATCTT 
    TTTTGTTTTA GGATGATAAA GAGAAGTAGA GAACTCACGA GCGATAAGCA 
    TTTCGAAACG AAACAGATGC AGTACATAGG AAGTAAACTA GGATTACAAC 
    AAGATATCAT CTTATGTTAC ACAAAGCTGG GAAACTCATT GAGTAGTGTC 
    GGTGTTGGTT GCTCCAGCAG CATCGGCTTC TGAAGTGGTC TTAGCCATCA 
    CCTCACCTGG AGGAGGATGG TCAAACTTGC ATGTTGCCCC GTATTTGCAA 
    GTTCCTGTC

AT3G12670.1

Model type
Protein coding
Short Description
CTP synthase family protein
Computational Description
embryo defective 2742 (emb2742); FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT1G30820.1); Has 10841 Blast hits to 10805 proteins in 2914 species: Archae - 237; Bacteria - 5484; Metazoa - 258; Fungi - 230; Plants - 171; Viruses - 0; Other Eukaryotes - 4461 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G12680.1

Model type
Protein coding
Short Description
floral homeotic protein (HUA1)
Curator Summary
Member of the floral homeotic AGAMOUS pathway.
Computational Description
ENHANCER OF AG-4 1 (HUA1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT2G47850.3); Has 2136 Blast hits to 795 proteins in 118 species: Archae - 0; Bacteria - 0; Metazoa - 325; Fungi - 89; Plants - 1572; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink).
Link
InterPro Scan - TAIR