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GT18599

CSHL Arabidopsis genetrap mutant lines

Original: GT18599

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18599

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14389581 [Map]; Strand: w
      • AT4G29180.1 - [+] show detail - root hair specific 16
        Distance: 0; Region: exon12 (3UTR)
      • AT4G29180.2 - [+] show detail - root hair specific 16
        Distance: 0; Region: exon12 (3UTR)
    Flanking Genome Sequence: GT18599 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAACTTTCA 
    GTGACAAAAA CAAATGATGA ATCAAACCTT GAGTTAGTTA AAATAACTTA 
    TTTCTCACAC TACCTTGCCA TTGGGCCAAA CGTGGAGTAA TCTCCAAAAG 
    AAAGTGAAAC CGATCCAGAT GAGCTATTAT ATTCATTGCT GCTATAATTC 
    TGAACCGTCG ACTTGGTCTT CGTGTACTTC TCTTTCACTA CTTCCTTCTC 
    CTCCAACGCG AGCATTTTGG CTCACGAGCT AGCTCGGCAG CTAAGCACTG 
    TTTCAAGTCA GACACGATCT GGTTTGTGTT TGGTCTGTTG GT

AT4G29180.1

Model type
Protein coding
Short Description
root hair specific 16
Computational Description
root hair specific 16 (RHS16); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root hair; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT4G29450.1); Has 136747 Blast hits to 120807 proteins in 4421 species: Archae - 131; Bacteria - 13766; Metazoa - 43367; Fungi - 9914; Plants - 51055; Viruses - 402; Other Eukaryotes - 18112 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G29180.2

Model type
Protein coding
Short Description
root hair specific 16
Computational Description
root hair specific 16 (RHS16); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root hair; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT4G29450.1).
Link
InterPro Scan - TAIR