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Mutant Lines
GT18606

GT18606

CSHL Arabidopsis genetrap mutant lines

Original: GT18606

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18606

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 17200386 [Map]; Strand: w
- AT2G41240.1 - [+] show detail - basic helix-loop-helix protein 100
  Distance: -1066; Region: intergenic
- AT2G41250.1 - [+] show detail - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
  Distance: 273; Region: intergenic

TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TACATATAAT 
GGGCTACAAA CATGTAAACT CATTGCAAAA AAAAGAAAAA GAAAAAGCAN 
ATTATCTTAG GGCCAATTGT TTTTAGAGAA GCCCATTTAG ATCTTTGGAT 
TTAAAGAGGC GTAAATAGAA TGAGGAAAAA TCCAAAATAT CTCCGTCTCT 
CTTTTATCCT CGTCCATGGA TAATAGAATA GAATCAAGGC TTTTGGCCTG 
ACCGAGATGA CCGGAGTTAA CTTGTGTAAT ATGATCAGAA AGGCTATAAT 
ATAATACAAA ATAAACGATA GACACTACAC CATATAAGAT GTAATTAATA 
AATTTAAATA AGGAATATAC ATTTGTTAAA TATTTGTAAA CACTTAATGC 
CTACGTATAT ACTACATAGA AATGGTTGGA TTCAGGAGAA AAGCCTTAAC 
ATATTCCACG TGATTTGCTC GTGCCTCTCA ATAGTCCACG TCCACCAAAC 
CCGGATCCTC

5 prime edge [+] show sequence

Chromosome: 2; Position: 17200445 [Map]; Strand: w
- AT2G41240.1 - [+] show detail - basic helix-loop-helix protein 100
  Distance: -1125; Region: intergenic
- AT2G41250.1 - [+] show detail - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
  Distance: 214; Region: intergenic

CCTACTTTAT CCCTGATTAT ATGTAGATAA TCTCTAAAAT GTGAAGTATT 
TGACTATTTG TCAACAATTA TGAACATAAT GTTAAAATAC AACCCACAAT 
AATCACAGAT ACAGTTTGAT TAGATTTATC CATTGATATG TTGGCAACTT 
TTGGTATTGT CCATACGTTG CCTAGGTTCA ACTCTAAATT TCCATTTTTC 
TTGATCTCTT CTTGATCACA TATTTAAAGA ACTCAATTCT CCTTCTTTTA 
TAAGCAAATG TCGAAAACAG TACAACACTT CGGTGCGGAT TAAGAACGAT 
CATGAAGCTT ATTATTGATC TTTTATTATA CATGGTTTTC TGGTTTTCTA 
CATTAGCCGC GACATATATT ACACACATTA TGCTACAAAA GAGAAATGGA 
ATATACAAAA CTGCTCACAC AAAAAAAGAA GAAGCTAAAA CTGAAGTCTG 
AACATGTCTC TGAACCATTT CTCTCATATG CTTTTGCTTC AGACCT

AT2G41240.1

Model type: Protein coding
Short Description: basic helix-loop-helix protein 100
Curator Summary: Encodes a member of the basic helix-loop-helix transcription factor family protein.
Computational Description: basic helix-loop-helix protein 100 (BHLH100); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to water deprivation, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Achaete-scute transcription factor related (InterPro:IPR015660), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G56970.1); Has 1014 Blast hits to 1014 proteins in 111 species: Archae - 0; Bacteria - 2; Metazoa - 217; Fungi - 10; Plants - 760; Viruses - 12; Other Eukaryotes - 13 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G41250.1

Model type: Protein coding
Short Description: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Computational Description: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity, phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), HAD-superfamily hydrolase, subfamily IA, REG-2-like (InterPro:IPR011949), HAD-superfamily hydrolase, subfamily IA, variant 1 (InterPro:IPR006439); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G14310.1); Has 5345 Blast hits to 5345 proteins in 1611 species: Archae - 258; Bacteria - 4323; Metazoa - 249; Fungi - 67; Plants - 142; Viruses - 0; Other Eukaryotes - 306 (source: NCBI BLink).
Link: InterPro Scan - TAIR