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GT18608

CSHL Arabidopsis genetrap mutant lines

Original: GT18608

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18608

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT18608 - 3-prime edge 
    TTTCATCCCT AATCAAAAAA AACCAAACCA TTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 148977 [Map]; Strand: c
      • AT4G00340.1 - [+] show detail - receptor-like protein kinase 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT18608 - 5-prime edge 
    CCCTGCCTTT GATGATTCTT TCCTTTGTAC AGATGGTGGT GGAAGAAGGA 
    AGAGGAGAAG AAGAAGAGGA AGATAAGTAG TACATGGCAT TGGGTACTCT 
    CGGGTGGGTT AATGTTTGGT TGGTGGTGTT GATGATATTT TCTCGGTGGT 
    GATACTGATA GACATGGGAA AAAAAGAACA AAAGCTCTCT TTAACTATTA 
    GACGTTTGAA ATGTGGAGAG AATTTTTGCA AGATAAAATC TGTAAAAGCT 
    GTGACTTCAT ACCTCCAAAA AGTAAATTCA TTCAGAAAAA GGTTTTGGAA 
    CTATAGTTCC TAACGCCAAA GTTACTATAT TAACCCTCAT TCATCAACAC 
    CGGCAGGATA GGAACTAAAA GAAAGAGAAG GGCAGAATAG GAATTGAGAA 
    GAGGGAGGTG GCAGTGGCAG ACATAACTGG CTAGAAGTCA AAGCCATGAC 
    AGCTTTTTTC TCTTCTTCTT AAAAGATTCC TAACCTTTTT CTTAATTATT 
    TCTAATTAAT TACTTTATGC AGCAAACAAA AGGGGGTA

AT4G00340.1

Model type
Protein coding
Short Description
receptor-like protein kinase 4
Curator Summary
Encodes a receptor-like protein kinase that is expressed in roots.
Computational Description
receptor-like protein kinase 4 (RLK4); FUNCTIONS IN: sugar binding, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 118915 Blast hits to 117390 proteins in 4385 species: Archae - 97; Bacteria - 13085; Metazoa - 43904; Fungi - 9417; Plants - 35014; Viruses - 433; Other Eukaryotes - 16965 (source: NCBI BLink).
Link
InterPro Scan - TAIR