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GT18638

CSHL Arabidopsis genetrap mutant lines

Original: GT18638

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18638

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 150698 [Map]; Strand: w
      • AT2G01290.1 - [+] show detail - ribose-5-phosphate isomerase 2
        Distance: -316; Region: promoter
    Flanking Genome Sequence: GT18638 - 3-prime edge 
    ATATCCCGTT TTCGTTTCCG TCCCGCAAGT TAAATATGAA AATGAAAACG 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTATATACAC 
    ATACGACGCG AACGGATCGT ATCGGTATAT TCCATTCTTT TAAACATTAC 
    TCTATAATTA ATTACGTACA AACAAAAATT AAGGGTGCGT CAGTAAAAAG 
    AAAAGAAAAG ACAGAATATT TTGGGAATCA TGGGGAAAGT GAAGCACCGA 
    TTTGGTAAAT GTAAATAAAT GTTGGGTTAG TTTATGTAAA TAAAGACAAA 
    ATATGGGACC GAAACAAAAA ACGAATTCAG GTCTGTGTAA CCTCGAAAGT 
    GAGACCGTTG TCGCCCACAA AACACAAACC CTATCTTTTC TTCTTCTTCT 
    TCTTCGTTCA GTCTTCACTT TCTTTTCTTC TCCCC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 150718 [Map]; Strand: w
      • AT2G01290.1 - [+] show detail - ribose-5-phosphate isomerase 2
        Distance: -336; Region: promoter
    Flanking Genome Sequence: GT18638 - 3-prime edge 
    CGTTCGTTTT CGTTACCGGT ATATCCCGTT TTCGTTTCCG TCCCGCAAGT 
    TAAATATGAA AATGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC 
    GTTTTCATCC CTATATACAC ATTCGACCCG ACCGGATCGT ATCGGTATAT 
    TCATCTCTCT CGACCAATAC TCTATAATTA ATTACGTACA AACAAAAATT 
    AAGGGTGCGT CAGTAAAAAG AAAAGAAAAG ACAGAATATT TTGGGAATCA 
    TGGGGAAAGT GAAGCACCGA TTTGGTAAAT GTAAATAAAT GTTGGGTTAG 
    TTTATGTAAA TAAAGACAAA ATATGGGACC GAAACAAAAA ACGAATTCAG 
    GTCTGTGTAA CCTCGAAAGT GAGACCGTTG TCGCCCACAA A

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 150752 [Map]; Strand: w
      • AT2G01290.1 - [+] show detail - ribose-5-phosphate isomerase 2
        Distance: -370; Region: promoter
    Flanking Genome Sequence: GT18638 - 5-prime edge 
    GATCCTATTA AAAACAAAAA CCGGCATGAT GATTACGTAG TATATTTGAC 
    CAGACATATC CTAATGTATG ATTATAAACC TCGTGTGTGA GTTATCAAGA 
    AACACTT

AT2G01290.1

Model type
Protein coding
Short Description
ribose-5-phosphate isomerase 2
Curator Summary
Cytosolic ribose-5-phosphate isomerase. Knockout mutation causes chloroplast dysfunction, late flowering and premature cell death.
Computational Description
ribose-5-phosphate isomerase 2 (RPI2); CONTAINS InterPro DOMAIN/s: Ribose-5-phosphate isomerase, type A, subgroup (InterPro:IPR020672), Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: Ribose 5-phosphate isomerase, type A protein (TAIR:AT1G71100.1); Has 5035 Blast hits to 5035 proteins in 1937 species: Archae - 235; Bacteria - 3542; Metazoa - 112; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink).
Link
InterPro Scan - TAIR