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GT18647

CSHL Arabidopsis genetrap mutant lines

Original: GT18647

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18647

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15356747 [Map]; Strand: c
      • AT2G36632.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 173...
        Distance: 983; Region: intergenic
      • AT2G36640.1 - [+] show detail - embryonic cell protein 63
        Distance: 87; Region: intergenic
    Flanking Genome Sequence: GT18647 - 5-prime edge 
    TCCTACTTTC TCCCTGGTTC CCATAAGTTT GAACTGACCA TAAAACAAAC 
    ATATATTAAC TTTTTTTTTT TTGGAAAATT GGGGGGGTTT TTTTTGGGGC 
    CCCCAAATCC CCAATTTTTC CCCCCCTTTT TTGGGTTTAC CGGGGGCCCG 
    GAAAAAAATT TGGGGGGGTT TTTTTTTGGT CCCCCCCGAA AAATTGGCCG 
    GGGCTTTTTT TTTTGGGGGC CCCCAAAAGC CCACCCAAAT TTTTGGGTTT 
    TGAACCCCCC AGGGGGAAAA TTTTTTTGGG CCCCCCAAAA AAAAAACCCC 
    GGTTTTGGGG GGGGCCATTT TTTTTTGGGG GTCCCCTTTT AAAAAAACCC 
    CTTGGAAAAA AAAAAAAAGG GGGGGTTTTT TCCTCCCCCC CCC

AT2G36632.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G36640.1

Model type
Protein coding
Short Description
embryonic cell protein 63
Curator Summary
Encodes putative phosphotyrosine protein belonging to late embryogenesis abundant (LEA) protein in group 3 that might be involved in maturation and desiccation tolerance of seeds. RFLP and CAPS mapping place it on chromosome 4 but the nucleotide sequence maps it to chromosome 2.
Computational Description
embryonic cell protein 63 (ECP63); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: fruit, seed; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 4 (InterPro:IPR004238); BEST Arabidopsis thaliana protein match is: late embryogenesis abundant protein, putative / LEA protein, putative (TAIR:AT3G53040.1); Has 29213 Blast hits to 16834 proteins in 2229 species: Archae - 326; Bacteria - 11175; Metazoa - 5508; Fungi - 2029; Plants - 3175; Viruses - 194; Other Eukaryotes - 6806 (source: NCBI BLink).
Link
InterPro Scan - TAIR