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Mutant Lines
GT18648

GT18648

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

semi-sterile (unconfirmed)

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT18648

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 11589479 [Map]; Strand: w
- AT1G32180.1 - [+] show detail - cellulose synthase-like D6
  Distance: 0; Region: exon1 (CDS)

GACAACAATC CCGGTCCGGC GTCGCTTTCA ATCGTTCTCC TGGAAATCGA 
TTCCAATCAG GAGTCGGTTC CGTCCGTTTC CGGAGACATC GTTTCCGGTT 
CATCTGGTAA AGACAACGAA CCGGATCTAA CCGATGTGAG AATCAATGTA 
GGTGAAGAAG AAGAAGACGA TACCTTGCTT TCCAAGATAT CTTATTCTCT 
TACTCGTGTC GTCAAAATCT CTCCGATCAT CATCGCTCTT TATCGGTAAT 
AATAATATAT ATTTAAAAAA TCTCTGTCGT GTCTGTTACA AACACTTTGA 
TTTGTCACAA AGCATGATCT TTTAGGGATG TTTTTCTGAT TTAGGTTTTG 
TTTTTTTATA ACAGGATTCT AATAGTTGTT CGAGTAGTAT CTCTAGCTC

3 prime edge [+] show sequence

Chromosome: 1; Position: 11589477 [Map]; Strand: w
- AT1G32180.1 - [+] show detail - cellulose synthase-like D6
  Distance: 0; Region: exon1 (CDS)

CAACAATCCC GGTCCGGCGT CGCTTTCAAT CGTTCTCCTG GAAATCGATT 
CCAATCAGGA GTCGGTTCCG TCCGTTTCCG GAGACATCGT TTCCGGTTCA 
TCTGGTAAAG ACAACGAACC GGATCTAACC GATGTGAGAA TCAATGTAGG 
TGAAGAAGAA GAAGACGATA CCTTGCTTTC CAAGATATCT TATTCTCTTA 
CTCGTGTCGT CAAAATCTCT CCGATCATCA TCGCTCTTTA TCGGTAATAA 
TAATATATAT TTAAAAAATC TCTGTCGTGT CTGTTACAAA CACTTTGATT 
TGTCACAAAG CATGATCTTT TAAGGATGTT TTTCTGATTT AGGTTTTGTT 
TTTTTATTAC AGGATTCTAA TAGTTGTTCG AGTAGTATCT CTAGCTCTGT 
TTCTCTTCTG GAGAATCAGA AACCCAAACA ACAAAGCATT ATGGTTATGG 
TTACTCTTCT GTAATCTGTG AACTCTGGTT TGCTTTCTCT TGGTTACTTG 
ACCAAATCCC TAAGTTGTTT CCTGTGAACC ACGCAACCGA TATCGAAGCC 
TTAAAGGCGA CATTCGAAAC GCCAAACCC

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 11589618 [Map]; Strand: w
  - AT1G32180.1 - [+] show detail - cellulose synthase-like D6
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: GT18648 - 5-prime edge
```
CTGGACGAGG TACTTGTTGT AATCAGAGCT GCTTCCGAAA TCGCTGCCGG 
AATTTGACAC GTGGCTGATT ATGGGATGTC TTAGAGGAGA TTCTCCGTCC 
ATC
```

AT1G32180.1

Model type: Protein coding
Short Description: cellulose synthase-like D6
Curator Summary: encodes a gene similar to cellulose synthase
Computational Description: cellulose synthase-like D6 (CSLD6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3332 Blast hits to 2680 proteins in 615 species: Archae - 13; Bacteria - 1453; Metazoa - 5; Fungi - 21; Plants - 1756; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).
Link: InterPro Scan - TAIR