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GT18667

CSHL Arabidopsis genetrap mutant lines

Original: GT18667

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18667

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24674837 [Map]; Strand: w
      • AT1G66220.1 - [+] show detail - Subtilase family protein
        Distance: 1176; Region: intergenic
      • AT1G66230.1 - [+] show detail - myb domain protein 20
        Distance: -2317; Region: intergenic
    Flanking Genome Sequence: GT18667 - 3-prime edge
    TTACCGACCG TTACCGACCG TTTTCATCCC TAATGTCACA CATAACTTAC 
    AGGGTAGCTT CAAGATATCT ATGGATTGAA TCAATCAACG GTTCAGATTG
    AAAGTTATTA ATTTCATTCA ATTCATTTTC CCCATTTCTA TATGAACTTA
    TTTCTGTTGT TAAGCAATAA ATTTGACATT TCAACAAAAC AAAGTAAGAT
    ATGAATCAAA AGTTGTAACA ACAAAAACTT ATACAACTCA TTTTTTTTTG
    GGGAATAGGT AAAAACATAA AATCCTTGTA AAAAAAAATC TCCAAATAGC
    CCTTTAAACT TTTTTTCCCC AAATCTTTTG CAAAGCCGAA GTTACCAGAA
    TCTTTCCCCA AAAAGGCCCT TTTTTGAAAA TGGAAACTTA AAATCACCCC
    TTAATGGATT TCCTTTCCAA TAATTCAATA GGGTTGGGCC CCGAAATTTA
    TTTCTGGAAA AATTTAGGAA AACCATTTTT AAGGTTTATG GATGGGGATA
    AATCCCCAAA AAAAAAAAAA TTCCTAAAAA TTTTGGAAGT AAAATATTCC
    CTCCCCAAAA CATTATCTTA GCCAACTTAA AGAT

AT1G66220.1

Model type
Protein coding
Short Description
Subtilase family protein
Computational Description
Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT1G66210.1); Has 8166 Blast hits to 7068 proteins in 1085 species: Archae - 257; Bacteria - 4971; Metazoa - 68; Fungi - 200; Plants - 1982; Viruses - 0; Other Eukaryotes - 688 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G66230.1

Model type
Protein coding
Short Description
myb domain protein 20
Curator Summary
Encodes a putative transcription factor (MYB20).
Computational Description
myb domain protein 20 (MYB20); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 43 (TAIR:AT5G16600.1); Has 8410 Blast hits to 7811 proteins in 453 species: Archae - 0; Bacteria - 0; Metazoa - 663; Fungi - 296; Plants - 5767; Viruses - 4; Other Eukaryotes - 1680 (source: NCBI BLink).
Link
InterPro Scan - TAIR