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GT18676

CSHL Arabidopsis genetrap mutant lines

Original: GT18676

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18676

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23452731 [Map]; Strand: w
      • AT1G63230.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 420; Region: intergenic
      • AT1G63240.1 - [+] show detail - unknown protein; Has 460 Blast hits to 413 proteins in 106 species: Archae - ...
        Distance: 3290; Region: intergenic
    Flanking Genome Sequence: GT18676 - 3-prime edge 
    CAAGCCAAGC AAGTTCATTT TATGCTCTGT TTCAGATTGC AGAGTCGGTT 
    ACGACTCAAA ACAGACTAAT TAATAGCTCC ACTCATATGA TTACAGGTTT 
    CATGACTATT CATTAAGCTC CATTAAAAGA CTCTACACAA GACAGAATCT 
    TCCGTTCATT AAGCACACAC GTCTTCATCT CACTCGACC

AT1G63230.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G63630.1); Has 57300 Blast hits to 14267 proteins in 286 species: Archae - 3; Bacteria - 43; Metazoa - 749; Fungi - 672; Plants - 54190; Viruses - 0; Other Eukaryotes - 1643 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G63240.1

Model type
Protein coding
Computational Description
unknown protein; Has 460 Blast hits to 413 proteins in 106 species: Archae - 5; Bacteria - 12; Metazoa - 152; Fungi - 46; Plants - 43; Viruses - 2; Other Eukaryotes - 200 (source: NCBI BLink).
Link
InterPro Scan - TAIR