1. Home
  2. Mutant Lines
  3. GT18679

GT18679

CSHL Arabidopsis genetrap mutant lines

Original: GT18679

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18679

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11113128 [Map]; Strand: w
      • AT4G20725.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT18679 - 5-prime edge 
    CAGATATCTC GCCAAAAACG AATATGATGT TCATCACCAG GAACCCAGCA 
    AGTCCCCCGC GATATCACAT CCACAAGCCC TCTTACAATG CTTCTCCAAG 
    TTGATGACCA AGTCCCCTTC TTACGCAGCC ACTGACAATC CCGGAGATCG 
    CCAATTTTAT ACTTTTTTCT TAAGACCTCA GCCCAAAGAC TCGACTGGTC 
    CTGCAGCAGA CGCCAACCAA CCTTAGCAAT AAGAGCCTTG TTCATCAATT 
    TCGCATTGCG AATGCCCAAA CCCCCATCTT TCTTAGGTAA GCAGACCTTT 
    TTCCAAGACA CCAAGTGTTG TTTTCTCTTC TCAGCCGTGC TTCCCCAAAG 
    AAAGGAACGA GAAGCTTTGT CCAATCGAGT AATAGTCGAT TGTGGTAGCG 
    CAATAGAACT CATTGTATGG ACCGGTATAG ATGATAATAC AGCTTTGGTA 
    AGCGTCATCC GTCCCGCAAA ACTCAAAGTT CTCTCCTTCC AACCCGACAA 
    ACGGGAAGAG ACCTTCTCCA AAAGTTCACT GAAAGTATCC TTATTGATGC 
    GTTTATGAAG TACTGGCATC CCAAGATATT TACCCAAGTC TTTTGTTGCT 
    TTAATCCCGC TCTCCTCACT TATCAGTTTG CTCAGATCAC GTGAGACATT 
    CCCTGAAAAA AATATTTTTG ACTTCTCCAG GCTAATCTTT TGACCAGAGG 
    CTATACAAAA TGTCTCCAGC ACCTTCC

AT4G20725.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.2e-31 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR