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GT18695

CSHL Arabidopsis genetrap mutant lines

Original: GT18695

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18695

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24424743 [Map]; Strand: w
      • AT1G65670.1 - [+] show detail - cytochrome P450, family 702, subfamily A, polypeptide 1
        Distance: -790; Region: promoter
    Flanking Genome Sequence: GT18695 - 3-prime edge 
    CGACGTTACC GACCGTTTTC ATCCCTAATC TACACTACTT ATCTATCGTG 
    AGATATATTG GATTAGAAGG TAATCGATAC ATATGTTTCT TGAACGCTAT 
    CGGTGTGGAT AGAGTGTACA ATTTGAATTT TGGTTTGTAT CATACTTCAG 
    TTAAAAATCA TTGTTAACAA ATTTAAATTA AAAAAGTTAC TTAGTGAAAT 
    TGGCACCTAA TTAGAGCGAT ACTTAATTTG GGTTGCTTTG TCCTACTTAA 
    AT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22764234 [Map]; Strand: c
      • AT1G61660.4 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: -7934; Region: intergenic
      • AT1G61667.1 - [+] show detail - Protein of unknown function, DUF538
        Distance: -3429; Region: intergenic
    Flanking Genome Sequence: GT18695 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAATCTA 
    CACTACTTAT CTATTTCAGA TATTTGGATT AGACGGTAAT CGATACAAAT 
    GTTTCTTGAA CGCTATCGGT GTGGATAGAG TGTACAATTT GAATTTTGGT 
    TTGTATCATA CTTCAGTTAA AAATCATTGT TAACAAATTT AAATTAAAAA 
    AGTTACTTAG TGAAATTGGC ACCTAATTAG AGCGATACTT AATTTGGGTT 
    GCTTTGTCCT ACTTAAATTC CTCCCCCCTC CCGACAAGNN TNGACTTGNT 
    AATGCTCTTT GAGATTCTTG AATCTTAAGC CTGTTTTTTT TTAAAAAAGA 
    ACATATTTGA ATCTGTGTTA GCTGATATAG AATAAGAGTA AGAAACTCGA 
    AATACCAGAT TAAGAAGTAT GAGAGACAAA AATAGATGGT CTGCCTCCTG 
    AACAAAGAAG ACAAAGACAA GAACCGGCTG CTTCTGATTC ACCTTGAACG 
    ATAGAAAGAT TACAAAGGTT CGTAGGAAAG ATATATATTA TCTATTGGTT 
    AGTTGCTAAT TTGCTATAAG CTCTTAGTGT TTTTCTTGTA AAATCATCTA 
    TAGTATCATA AAACCTTCTT GAACAACATC GACGTTTTGA ACTGCAAACG 
    TTAAAGATTG TTAAAGGTCC AATGCAAGGC TTGCATGCAA CTGCATGGGC 
    AAACATTTTT CTACTTTTG

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22764152 [Map]; Strand: c
      • AT1G61660.4 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: -7852; Region: intergenic
      • AT1G61667.1 - [+] show detail - Protein of unknown function, DUF538
        Distance: -3511; Region: intergenic
    Flanking Genome Sequence: GT18695 - 5-prime edge 
    CCGACGTCGC AAATTATTTA TCCTGATGAG TACATTTTTT TTTTGGGCCA 
    ACCTCCGGGG AATCCCTAAA ATTCCAAAGG TGGTTAAAAC CACTTAACCC 
    ATTTTCCGGG GCTTCCGGGT TTTGAAGGGC CCAAAAAAAA AACAAAAAAC 
    CTTTTAAGCC CCGCCCCCCC CAAAATTTTT AGAATTTTCT TACCCCAGTT 
    TCCAATTTCC ATTTGGAGTT TTGAACCCAA AAAAACCCAA ATTTAGGGGC 
    CTAAAACCCC CTTAATGGGT GGCCCCTAAA ATAAATCCTA AGAATTTTTT 
    TTTGGAATTG ATGGGAAAAA AACTCCCTTT CTTTCCTTTT TTTAAAAAAA 
    GGAAGGAAAT TTTTTTACCC CAAAAACTAA TTTAAAAGTT ACCCCAAAAG 
    GGGGCCCTTA GGGGCCAAGG GCCACCCAAA AAATTGAACA AAAAAAACCT 
    AAGGCCCGGG GAATTTGACC CCCAAATTTC AAAAAAAAAC CCACCTTTTT 
    TGGGTTAACC GGAAAAG

AT1G61660.4

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G20640.1).
Link
InterPro Scan - TAIR

AT1G61667.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF538
Computational Description
Protein of unknown function, DUF538; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT5G54530.1); Has 441 Blast hits to 441 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 440; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G65670.1

Model type
Protein coding
Short Description
cytochrome P450, family 702, subfamily A, polypeptide 1
Curator Summary
a member of the cytochrome P450 gene family. molecular function unknown.
Computational Description
"cytochrome P450, family 702, subfamily A, polypeptide 1" (CYP702A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 702, subfamily A, polypeptide 2 (TAIR:AT4G15300.1); Has 23293 Blast hits to 23240 proteins in 1360 species: Archae - 56; Bacteria - 2869; Metazoa - 9625; Fungi - 3612; Plants - 6281; Viruses - 3; Other Eukaryotes - 847 (source: NCBI BLink).
Link
InterPro Scan - TAIR