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GT18721

CSHL Arabidopsis genetrap mutant lines

Original: GT18721

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18721

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2475780 [Map]; Strand: c
      • AT5G07770.1 - [+] show detail - Actin-binding FH2 protein
        Distance: 0; Region: exon3 (CDS)
      • AT5G07770.2 - [+] show detail - Actin-binding FH2 protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT18721 - 3-prime edge
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAGCCTAGA AGATCACCTC 
    CACCACCACC TCCGAGGTTT GATGCCTTTG ATCATAAGGG TGCAAGAATG
    GTTTGTGGTT TTCGATGTCC AGTTACAAAA AGGTCTTCCC TGAAGCCTTT
    ACATTGGGTT AAAATAACAA GGGCTTTGCA GGGGAGCTTA TGGGATGAGT
    TACAGATACA ATATGGAGAA TCACAAACGT ATTGAACTTA ACTTTATTGA
    CCAATCCATG TAATTCAATT CTGTGATACT GAGTTTTCTT TTATCAACCA
    TTGCTTTTTT TTTGGTGGTG GTGGCAAGGG CAATAAAACT TGATGTACCA
    AAAATAAAAA CCCTTTTCTC TGTTGGGGCA AACCCAAAAC CAAACCCAAA
    CCCTGAAAAA GTTCCCCGGG AAGGCCATGT ACCTATAAAC AAGTAGTATT
    ACTTTCGGGG GAAAACTGAA AAAAATTTGG TTTTTAAAGT GGAACAAAGC
    TACTCTCCAG CATCTCTTTC CCTAAAA

AT5G07770.1

Model type
Protein coding
Short Description
Actin-binding FH2 protein
Computational Description
Actin-binding FH2 protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: actin binding (TAIR:AT5G07740.1); Has 32498 Blast hits to 13926 proteins in 764 species: Archae - 52; Bacteria - 3235; Metazoa - 13136; Fungi - 3419; Plants - 6778; Viruses - 1558; Other Eukaryotes - 4320 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G07770.2

Model type
Protein coding
Short Description
Actin-binding FH2 protein
Computational Description
Actin-binding FH2 protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: actin binding (TAIR:AT5G07740.1).
Link
InterPro Scan - TAIR