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GT18728

CSHL Arabidopsis genetrap mutant lines

Original: GT18728

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18728

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23059486 [Map]; Strand: c
      • AT5G56980.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -1744; Region: intergenic
      • AT5G56990.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily pro...
        Distance: 1386; Region: intergenic
    Flanking Genome Sequence: GT18728 - 5-prime edge 
    TTCATCCTAC TTTCTCCCTG GTTATCCGTC GTTATAGTAA ATGCTGCTAT 
    GGCGACCCAC GTGGGTGTAG GTGTAGCCAC TAGCCAGTTA CATGCAAGTA 
    TGCAAATGCA ATAACTTTTA ATAATAATAA TAATAATAAA AAATGAGAGA 
    CGTGTAGCTA CGAGTGGACC AATTTTTATA GTAATATATT TTCAAACTAT 
    GTGTTTAAGA AATCAAAGTC AACCGTAAAA GGTCGGTGTA GCAGCTAGCA 
    CCCCCACGCG ATGTCGTCGA CTCCACATTT TGAGTAAATG TTCTCTTCTG 
    TAATATTTTA ATTTCAAAGT AGAAAAATCA AATTTAGAAG TCAGTTTTTA 
    GTCATTGTAT TTTTAATTTT AGTCATTGTA TTTTAACTTA AGTTACCTCT 
    TCACATTC

AT5G56980.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G56990.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily protein (TAIR:AT5G56920.1); Has 38 Blast hits to 38 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR