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GT18734

CSHL Arabidopsis genetrap mutant lines

Original: GT18734

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18734

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18694083 [Map]; Strand: w
      • AT3G50380.1 - [+] show detail - Protein of unknown function (DUF1162)
        Distance: 0; Region: exon10 (CDS)
    Flanking Genome Sequence: GT18734 - 3-prime edge
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTATTCTG 
    TGATGGTGGA CTCTTCTCCC CCTTCTATTA CTGTAACAAT TGATGGCGTA
    TCTCTGACCA TCGTCCATGA ACTTTCAGAA ACAAGGGACA GATTTCCCCT
    TTTTCGTGGT TCAGTCAATA TCACTCAGCT AACTGTACAA ATGCTATCTT
    CTAAAGTCAG GATTATGAGC ACATCAAACA TATTAGTGCT GTACTTTGAT
    GCTCAGACAA ACCAATGGTT AGTAGTTTTC TTTCCCTGGG TTCTTAATAT
    GCGTATGGCT TCCCTGATCA TGCATTTTTC TAGCCTTTAT AGAATTCCGT
    CAAGCAACTG TTTATTTTTT CTTCTNTNCC ACTCGACCAA AATAGGCGGG
    AATTTATTCA TTCAGTTGAA GTTAGTGCTT TCTACCGATC AACTTTTCAG
    ACTCGGGATC TTAACAATAC TATGCACAAA GTACCTACCC ATATTTACTG
    CAGAATAGGA AAGGCACTTA AAGATTTATA CTTCATTTTC CATGCAGTAT
    TGGGGATA

AT3G50380.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1162)
Computational Description
INVOLVED IN: protein localization; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein (InterPro:IPR009543); Has 365 Blast hits to 355 proteins in 118 species: Archae - 0; Bacteria - 0; Metazoa - 156; Fungi - 111; Plants - 61; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Link
InterPro Scan - TAIR