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Mutant Lines
GT18743

GT18743

CSHL Arabidopsis genetrap mutant lines

Original: GT18743

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18743

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 9646526 [Map]; Strand: w
- AT4G17170.1 - [+] show detail - RAB GTPase homolog B1C
  Distance: -160; Region: promoter
- AT4G17180.1 - [+] show detail - O-Glycosyl hydrolases family 17 protein
  Distance: 0; Region: exon1 (5UTR)

AAACGGTAGA GGCATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTACA 
CACCATTGTG CTCGACCGGA TCGTATCGGT ATATACGTCT CAGCTCGACT 
ATTTATAAAG AGACTGCATG TCGGTTTCTA TTTAAATAAA CGTCAAGCAG 
TGCGGTTTCT AAATAGGAAA CGACATAGAG ATTGAAATTG GCGACAATAC 
AGGTTGATGC ATCGCTGGAT TTGCTGGAAA ACAAACCGTC AATCTCCGTC 
TTTATAGAGA AAAAAAGATT CTCTTCTCTT CTCGTTCTCG TCATCGTCTT 
AAAGAAGGAA TTCGATTTTT CGCCTGAACC TGCGGATTTT TCGATTCTTC 
AAATTCAATG TCTTATGCTT ATCTTTTCAA GTATATCATC ATCGGCGATA 
CTGGTAACTC CTTCTCTTCT ACGTTATCTT TCTTCAATCC ATTTGGAATT 
GAGATGATCA AAACCTATAT ATGTTTCGTT ACGAAAATTG AAAAGCGAAT 
TGATCTGAAT CTGTGTCATA TCCAACTTTT TTAGTGGATT TAGGGGTCGA 
GAGAAGCTTT GGTGATGTTG ATTTTTGTAT ATTGATTCTG ATTTTCAGGA 
GTGGGGA

AT4G17170.1

Model type: Protein coding
Short Description: RAB GTPase homolog B1C
Curator Summary: member of RAB gene family
Computational Description: RAB GTPase homolog B1C (RABB1C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ER to Golgi vesicle-mediated transport, pollen sperm cell differentiation, cell growth; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: GTP-binding 2 (TAIR:AT4G35860.1); Has 27116 Blast hits to 27043 proteins in 734 species: Archae - 17; Bacteria - 131; Metazoa - 14131; Fungi - 4055; Plants - 2966; Viruses - 20; Other Eukaryotes - 5796 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G17180.1

Model type: Protein coding
Short Description: O-Glycosyl hydrolases family 17 protein
Computational Description: O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 2802 Blast hits to 2733 proteins in 160 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 65; Plants - 2718; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Link: InterPro Scan - TAIR