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Mutant Lines
GT18802

GT18802

CSHL Arabidopsis genetrap mutant lines

Original: GT18802

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18802

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 4; Position: 2758434 [Map]; Strand: w
- AT4G05450.1 - [+] show detail - mitochondrial ferredoxin 1
  Distance: -219; Region: promoter

TCAACACAAT TCTTTGCAGA AGATAACAAG ACAAATACAA AAGCAGTCTA 
GAAGAGAAAA CTTATAAGAA AAAGACACCA TCAAAGTTCC AACATCGTGA 
TCTAAACCGT TTCAGAACAA CAATGGAACA CGACACTTAT TGGTAGGCAC 
ACAACTATGA TAGTTCAAAA AATTATTGTC TAGTCTTCCA ATAACCAAGA 
ATCTAAGTCT TCAAGCAACT TCATCAGAAC TCTGATCGTC TTTCTGAAAC 
TCCTCTTCCA CTATCTTAAG AACCTGAGCC CAACCACTAC CAGCACTCAC 
GTCAAGATAA TCATAAGGAA CAGCTGTTTT CAAACCAGGA AGCACACTGA 
GACGGCTCTC AACAATCCTC AATTCCAATT CATCACATTC TCCATGAATC 
TTCTCAAGTT CTTCCCATGT AAACATCAAT GGCACAGCAA CTACCA

5 prime edge [+] show sequence

Chromosome: 1; Position: 23782155 [Map]; Strand: w
- AT1G64070.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: exon3 (CDS)

TCCTACTTTA TCCCTGCAAG CAAGTGTCTT CCTCTTAAAT TTCGGGCGGA 
AAATCTAGTC GAACTCGATA TGAAAGATAG CCGGCTCGAG TACCTCTGGC 
CAGGAACTCA GGTTAGTTAT TGCTTATTCT CATAGGCGAA TAATTTTGCA 
AAGGAAATAA TAAGACTCAT ATCATATGGA ACAAGAGGGT TGGTTTCTCA 
TTTTATGTTC TGTTTTGTGG ATTTTTAACA TTCAGCTGCT GACGAAACTC 
AAGAAGCTAA ATTTGGAAGG TTCATATAAT TTGAAGGAAC TCCCAGATCT 
TTCAAATGCT ACAAATTTGG AGATGTTA

AT1G64070.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Curator Summary: Encodes a TIR-NBS-LRR class of disease resistance protein effective against Leptosphaeria maculans.
Computational Description: RESISTANCE TO LEPTOSPHAERIA MACULANS 1 (RLM1); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: defense response to fungus, defense response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: stem, sepal, flower, carpel, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT2G16870.1); Has 18146 Blast hits to 14776 proteins in 597 species: Archae - 15; Bacteria - 1058; Metazoa - 1168; Fungi - 58; Plants - 15498; Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G05450.1

Model type: Protein coding
Short Description: mitochondrial ferredoxin 1
Computational Description: mitochondrial ferredoxin 1 (MFDX1); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: pollen tube development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: MITOCHONDRIAL FERREDOXIN 2 (TAIR:AT4G21090.3); Has 4425 Blast hits to 4425 proteins in 1188 species: Archae - 2; Bacteria - 2167; Metazoa - 246; Fungi - 135; Plants - 85; Viruses - 0; Other Eukaryotes - 1790 (source: NCBI BLink).
Link: InterPro Scan - TAIR