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GT18810

CSHL Arabidopsis genetrap mutant lines

Original: GT18810

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18810

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 937141 [Map]; Strand: c
      • AT4G02110.1 - [+] show detail - transcription coactivators
        Distance: 0; Region: exon8 (CDS)
    Flanking Genome Sequence: GT18810 - 5-prime edge 
    TCGTTAGGCG AACTTGGTCT TAGTTCCTGC AATACAAACT AGACGGTGGT 
    GGAATACTTG CCTCACTGTT GTGGTGTACT CTCAGTGAAT CTTTCCTACT 
    GACAGATCCA TCTGTAAATT TTGCCTGAGG CATCATCGGA GGGAACTCCT 
    CGCCATGCAA CATATCAATC TTGCCAAGAT CTCGAAAGAG TGACGTTCTT 
    TCCATGGAAG AACCAGATTT TGATGCAGAG GTATTAAAGG CAGACGAAGC 
    TTTTAGGCCC TTGTCATCCA TTCTCAAGGA ACGGTTTTGG CCACTTGACT 
    CTTTTCCCAA AGTATCAGTC TCTGGCGATC TCTGAAGTGT TTTCCTTGAA 
    TAAGTGGCTA GAGAAGAATG CCTTCTGATA CTCCTGTTAA TAGACGTCGA 
    GCCATCAGTC TCCATTTTGC TCATCCCTTG CTCAGGAGTC TTGTTTGCAA 
    CCCTAATGGG GGACACGTAA TTATGCTGCT GAGCAACACC TAGATCAGTA 
    GAGACCATTG CTTCAAAAGG TCTGTCCCGC CTTTTAGGGA GTTAACCAAT 
    TATCTTTGGA CGTATTACAT AATGATGACC CTTCCCTAAG AGGGAAATCT 
    TTTCCTCCCG GC

AT4G02110.1

Model type
Protein coding
Short Description
transcription coactivators
Computational Description
transcription coactivators; FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein (TAIR:AT1G67180.1); Has 6090 Blast hits to 4661 proteins in 497 species: Archae - 12; Bacteria - 945; Metazoa - 2581; Fungi - 684; Plants - 424; Viruses - 13; Other Eukaryotes - 1431 (source: NCBI BLink).
Link
InterPro Scan - TAIR