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GT18811

CSHL Arabidopsis genetrap mutant lines

Original: GT18811

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18811

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 18181682 [Map]; Strand: c
      • AT1G49160.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: intron2 (CDS)
      • AT1G49160.2 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT18811 - 3-prime edge 
    CTAGCCTATT ACTTCTTTGT ACTGAAAGGT TTACACATTT GAATGTGTCA 
    AGGGAAAACA AAATGGAGAA ACAGGGCATA TTTGGTCGAG CCTATTATTT 
    GGTAACAAAG AATTAAAACA ATTATGGAAG AGATAAAGGT GAAGTAGTTA 
    CCCGAATATA TCGACAAGTT GGGTCGATTT CAAGAACTTC TGGGTCAGGT 
    GGTTCAACAA TTGCAGAAGC ATCTTCTGAA CCTTCCATAT CTTATTAATC 
    TTTTTTATCT ATTCTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 18181448 [Map]; Strand: c
      • AT1G49160.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon3 (CDS)
      • AT1G49160.2 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT18811 - 5-prime edge 
    AGGATATGAA ATTCATTATT TCTTTAACTC TCTTGAACAA ATAATCAGTT 
    TTAAGGGATT CGACGAAGTA GATGGGATTG AAGTAGCGTG GAATCAAGTA 
    AGGATCGACG ATCTTTTGCA ATCACCAGAT TGTCTAGAGA GGCTATATTC 
    CGAAGTGCGG CTTTTGAAAT CTCTGAAGCA TAAAAACATC ATAAGGTTTT 
    ATAACTCGTG GATCGATGAC AAGAACAAGA CGGTTAACAT AATTACCGAG 
    TTGTTCACTT CAGGAAGTCT CCGGCAGTAT GTATTTTGCT CATTTTTATA 
    CTATCTTGTT ATGTCGCCGC GAAAATAGCG GTTTTGGAGT TGTGTTTAAA 
    GCAGCGAAAT CTTGGTTTTC TTGAAGGTAC CGTAAGAAAC ATAGAAAGGT 
    GAATATGAAG GCTGTCAAGT GTTGGGCGAG ACAGATTTTA ACGGGATTGA 
    AATATCTACA TAGTCAAGAT CCGCCGATAA TACACCGAGA TATCAAATGT 
    GACAACATTT TTATCAACGG TAATCATGGA GAAGTGAAAA TAGGAGATCT 
    TGGTTTAGCT ACTGTCATGG AACAAGCTAA TGCCAAAAGT GTGATTGGTA 
    TGAGCAATGC TTTTTCTTTT ATATAGTTTA CAAATTCGTT TTTCTTTGGT 
    TTTTTTAGAA TCTAAATTGA TAGTGTTATG TTATAACCAA CAGGAACACC 
    GGAGTTTATG GCGCCTGAGC TTTACGATGA GAACTACAAC GAGCTCGCTG 
    ATATATATTC GTTCGGGATG TGTATGTTGG AAATGGTGAC TTTTGAATAT 
    CCCTTATGTG AGTGTAGAAA CTCTGCTCAA ATCTAC

AT1G49160.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Curator Summary
Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its
Computational Description
WNK7; FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 6 (TAIR:AT3G18750.3); Has 106474 Blast hits to 105641 proteins in 3528 species: Archae - 85; Bacteria - 10301; Metazoa - 39520; Fungi - 10176; Plants - 28583; Viruses - 416; Other Eukaryotes - 17393 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G49160.2

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Curator Summary
Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its
Computational Description
WNK7; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 6 (TAIR:AT3G18750.3); Has 108759 Blast hits to 107794 proteins in 3536 species: Archae - 87; Bacteria - 10756; Metazoa - 40181; Fungi - 10521; Plants - 29052; Viruses - 410; Other Eukaryotes - 17752 (source: NCBI BLink).
Link
InterPro Scan - TAIR