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GT18815

CSHL Arabidopsis genetrap mutant lines

Original: GT18815

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18815

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3252198 [Map]; Strand: c
      • AT5G10336.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -133; Region: promoter
      • AT5G10340.1 - [+] show detail - F-box family protein
        Distance: -924; Region: promoter
    Flanking Genome Sequence: GT18815 - 5-prime edge 
    TGTTATTAAG GAATCTCGTA AGGTTTAATA CATCTATGGA TCGCCCAGAG 
    AGTCGTCCTT TCGGAGAAGT TGACCTCGCC TTAATCGAAG ATATATGCTG 
    GGAGATATAA ACGTTTACCT CAAGTGCAGC CAGTCATGAG ACCCAACTCT 
    ATAAAACCAG TCAGCTTCGG GATCGTTTTC CTTGAAAATC CTGATGAACT 
    AGGAAATGAT ATACCTATCT ACAGATCGCC CCAAGAGTCA GCTTTCTAAA 
    GAAGCCGACC TCGCCTCGAT CCGAGCTGTC TATTAGGAGT TATCATCACT 
    TCTCTGCACT AGACACAATT TCCCTGACAA ATCCGCAGCT GTCGGAACAG 
    CCAACTTCCG AATCAAACTC CAAGCGACCT AGAAAGAGAC AAGATACAAT 
    CTACGCGACA ACGGAAAGCT TCGAGTTTTA TAGAGACCTA TCTCATCTCT 
    ATAGGTGAAT TCTTTCGATG AATATCGCTA ATTTTCTACT GATAAGCCTC 
    TAGGTCAGAG ATTCAGTTAT GTCAAAACGG TTGACTTGGA AGAGAGTTTC 
    CCGACGAGTT AAAGAGAGAT AGGAGTCAAT CTACGTGTCG ATTTGAAGCC 
    CTGAACTTTA TCTTTCCAAC GAATCTAACC TAGATCCAAT CGAAGCAATC 
    TTCCAAGCGA TATTGGCGTT TCTTTCA

AT5G10336.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G10340.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR