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GT18825

CSHL Arabidopsis genetrap mutant lines

Original: GT18825

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18825

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 937162 [Map]; Strand: c
      • AT4G02110.1 - [+] show detail - transcription coactivators
        Distance: 0; Region: exon8 (CDS)
    Flanking Genome Sequence: GT18825 - 5-prime edge 
    CTTTCTCCCT GCCTAAGGTT GTCGTTAGGC GAACTTGGTC TTAGTTCCTG 
    CAATACAAAC TAGACGGTGG TGGAATACTT GCCTCACTGT TGTGGTGTAC 
    TCTCAGTGAA TCTTTCCTAC TGACAGATCC ATCTGTAAAT TTTGCCTGAG 
    GCATCATCGG AGGGAACTCC TCGCCATGCA ACATATCAAT CTTGCCAAGA 
    TCTCGAAAGA GTGACGTTCT TTCCATGGAA GAACCAGATT TTGATGCAGA 
    GGTATTAAAG GCAGACGAAG CTTTTAGGCC CTTGTCATCC ATTCTCAAGG 
    AACGGTTTTG GCCACTTGAC TCTTTTCCCA AAGTATCAGT CTCTGGCGAT 
    CTCTGAAGTG TTTTCCTTGA ATAAGTGGCT AGAGAAGAAT GCCTTCTGAT 
    ACTCCTGTTA ATAGACGTCG AGCCATCAGT CTCCATTTTG CTCATCCCTT 
    GCTCAGGAGT CTTGTTTGCA ACCCTAATGG GGGACACGTA ATTATGCTGC 
    TGAGCAACAC CTAGATCAGT AGAGACCATT GCTTCAAAAG GTCTGTCCGT 
    CCTTTTAGGA GTTAACCAAT TATCTTTGGA CGTATTACAT AATGATGACC 
    CTTCCTCAAG AGGGAAATCT TTTCCTCCCG GCTTAGAGAT TTCAACTGCA 
    GGCACGGCAC CAACCCTAAG ACCAAGAGGA CTGGTATTTG CAGGCTTGAC 
    AGAGGC

AT4G02110.1

Model type
Protein coding
Short Description
transcription coactivators
Computational Description
transcription coactivators; FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein (TAIR:AT1G67180.1); Has 6090 Blast hits to 4661 proteins in 497 species: Archae - 12; Bacteria - 945; Metazoa - 2581; Fungi - 684; Plants - 424; Viruses - 13; Other Eukaryotes - 1431 (source: NCBI BLink).
Link
InterPro Scan - TAIR