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GT18833

CSHL Arabidopsis genetrap mutant lines

Original: GT18833

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18833

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 7464553 [Map]; Strand: w
      • AT3G21260.1 - [+] show detail - Glycolipid transfer protein (GLTP) family protein
        Distance: 0; Region: exon2 (CDS)
      • AT3G21260.2 - [+] show detail - Glycolipid transfer protein (GLTP) family protein
        Distance: 0; Region: exon3 (CDS)
      • AT3G21260.3 - [+] show detail - Glycolipid transfer protein (GLTP) family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT18833 - 3-prime edge
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATATAAC 
    ACCATGACAT GGATGGATCT CTTCTGCTGC TTTTCACGTA ATAATTACAT
    GGTCATGATT AATTAATTAG GATACTTATT TGCAGACTAA AAACAAATTA
    TTCTCAAATA ATTTTATGTA ATATGTTTGT GTTCTTATGA AAGGTGGCTC
    TTAAACTGGT TCCAAACAAC AACACATTCA TCAATGTGCT TGCGGCGAAA
    GACGAGACAC ACCAAATGGT CCAAGATGAT ATTACAAGTC TAATTTCGTT
    GCTCATTCCA CTTCTAAGCC AACTCCATTC TATTTTGGTA GGCAATTTTA
    TTTTTTTTTT GTCAACAAAA AAAAAAGTTT TGCCCCTTGG GGAACCAATT
    AAAAATTCCA ATAATGGTTT TTCCTTTTAA ATTGGGGAAG GAATTTTCCA
    AAGTGGGCAA TTTAAAGCCC CCGGGGGGAA AAGACCCAAA AAAAAAAACT
    GAAGG
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 7464591 [Map]; Strand: w
      • AT3G21260.1 - [+] show detail - Glycolipid transfer protein (GLTP) family protein
        Distance: 0; Region: exon2 (CDS)
      • AT3G21260.2 - [+] show detail - Glycolipid transfer protein (GLTP) family protein
        Distance: 0; Region: exon3 (CDS)
      • AT3G21260.3 - [+] show detail - Glycolipid transfer protein (GLTP) family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT18833 - 5-prime edge
    TCCTACTTTC TCCCTGGTTT TATAGTCAAT TATAACATTC TTCTATGGCT 
    TGTTCCATGT TTTGTGACAT GTCTTTCACC AGCCGTTGCA ATAGCGCCAA
    TGTAAAATCC ATCGCTCTAT ATATATATAG TTTCGGAATC AGTAGTTTAA
    AAACAATTGT TGGTTCATAT TCAATTTGGA GTATATATGA ACCAAAATGA
    TACGTACCTC GTTAGCCAAA GAGCAGCTCT ACTACAACTT TTAGGTTTCC
    TAGAGGATCC CTCCTTGGCT TCTCNTCTCT CGACCACAAC CAAATTTGAG
    TACACAAGAG GATCAGATTC CCACATATTC TCTAACCTCT ACAAACAGAA
    CAGTTTAAAC AAAACAACAA CAACAAAAAT CAATAAAAAG AATAGGTCAT
    CATGGTGTTG ATAATTAATA AGAAAAATGA GGGTGGACGA AAAAACGAGG
    TCCATTCATT CGAGAGAGAG AGTATAACGA AAATGACCAT GAAAGCAACG
    TAAAGGTATC GATGGGTCTA CGTGTCTAAA GAGATATTAG GAGACGAGTC
    GCAACATCTG TTTTCTTTTT AATCTTGCTT ACTAATTATA CATTCCATTT
    TCTTAGGTAA CTAACAAGAT AAGATAATGT ATGCATATAA ATACTCTTTT
    TTCTTCTGTG TAACAAGATA AAAAAAA

AT3G21260.1

Model type
Protein coding
Short Description
Glycolipid transfer protein (GLTP) family protein
Computational Description
GLYCOLIPID TRANSFER PROTEIN 3 (GLTP3); FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: glycolipid transfer protein 2 (TAIR:AT1G21360.1); Has 413 Blast hits to 413 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 180; Fungi - 95; Plants - 108; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G21260.2

Model type
Protein coding
Short Description
Glycolipid transfer protein (GLTP) family protein
Computational Description
GLYCOLIPID TRANSFER PROTEIN 3 (GLTP3); FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: glycolipid transfer protein 2 (TAIR:AT1G21360.1); Has 426 Blast hits to 426 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 95; Plants - 108; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G21260.3

Model type
Protein coding
Short Description
Glycolipid transfer protein (GLTP) family protein
Computational Description
Glycolipid transfer protein (GLTP) family protein; FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: glycolipid transfer protein 2 (TAIR:AT1G21360.1); Has 501 Blast hits to 501 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 110; Plants - 118; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).
Link
InterPro Scan - TAIR