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GT18836

CSHL Arabidopsis genetrap mutant lines

Original: GT18836

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18836

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23063987 [Map]; Strand: w
      • AT5G57000.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon4 (CDS)
      • AT5G57000.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT18836 - 5-prime edge
    TTCCATCCTA CTTTCTCCCT GAATATAACT CTCTCCTTTT CCGGTGAGAC 
    AGACCGAGAA CGCGAAGGTG AACCAGAACC GTCTTTCTCC TTCTTCTTGG
    AATGGATGGT ATCGATGACG GCCTCGATTT CTTCCTTGGC TCTCTCCAAA
    ACATTAGGAG CCTTCACTTC ATCCACCGGT GTGTTCTCAC TGATATCATC
    ACTCCTTCCA TGAGTTTCTT TGTGATGATG ATGAAGATGG CGAGGAGATT
    TTTCCTTCAG GAATAAAGAT TTGAGGTCTT CCCTCGCCTT TTTCATCATA
    CTCGGTTTTT TCTTTCCATC TTCTGTCAAT GTAAACCATG TGAAACGAAG
    TGAGTCTTGA ACAAGAAACA GAAATGAACA CAAAACATCA CATTTGTATC
    CATGTTCAAA TCATAAAATA GACAAACTCT GTAGTTATGT TACTACCAAA
    CCCTGTAAGG CTCGAGACTA ACAATCGTTC CGAAAAAAAA ATTGAACGAT
    TTGATGCAAT GATGGGAGAA AAACTGGTAC CTGGTTTCTC TGATTTGAAT
    TCCATTTTAT CCCTGAAAGC GAATTTATAA CACATTAGCA AACTCCTGTA
    GCCACTCGTA ATGCTAAAAC ATTATATAAC CATAATGTTT CAACTCTC

AT5G57000.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 153 Blast hits to 116 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 33; Fungi - 7; Plants - 82; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G57000.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 141 Blast hits to 104 proteins in 24 species: Archae - 0; Bacteria - 6; Metazoa - 27; Fungi - 8; Plants - 82; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Link
InterPro Scan - TAIR