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GT18838

CSHL Arabidopsis genetrap mutant lines

Original: GT18838

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18838

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9029306 [Map]; Strand: c
      • AT2G21045.1 - [+] show detail - Rhodanese/Cell cycle control phosphatase superfamily protein
        Distance: 286; Region: intergenic
      • AT2G21050.1 - [+] show detail - like AUXIN RESISTANT 2
        Distance: -4784; Region: intergenic
    Flanking Genome Sequence: GT18838 - 3-prime edge 
    CGGTAGAGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGGTTTG 
    ACCAGGTCTA ATCAGTTTCA GACCAACATA ACTAATAAAG TATTTTCGTA 
    TCTACTGCTT AAGACAGTCT TTTCCTTTGT CTACACACAA AAACAAATTC 
    TAACCAAAAT TAATACTCAG CTTTTTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9029249 [Map]; Strand: c
      • AT2G21045.1 - [+] show detail - Rhodanese/Cell cycle control phosphatase superfamily protein
        Distance: 229; Region: intergenic
      • AT2G21050.1 - [+] show detail - like AUXIN RESISTANT 2
        Distance: -4841; Region: intergenic
    Flanking Genome Sequence: GT18838 - 5-prime edge 
    CCTACTTTCT CCCTGGTCAA ACCAAAAGCT CCTTTTTAAT CAATCTTTTG 
    AAAAATATTG CCTCCTGAGC CACGCCTTTT ACCACTACTT ACCATAATAA 
    AGACAGAGAA CAACATATGT GTATGTTCCA TCATAATTTA GATTCCCATT 
    TGTTTGTTTG TCATCAACCA CAATCATTTT CAGTTTCCCC TGTGTCCTCT 
    TTTTTACCAG ACAAATCTCA GAGAAGATTA ATCTACAAGC ATTTGTCTCT 
    ATATGCCCCT ATTTTATGTG TATATATATT GTTATTTTTC ATAGTTATTT 
    GAATAATACC TTGTGAAATT AAATGGCCGA AGTCCATACA TAAACGCATA 
    TGATATAATG TTTAGGCCGA AGAAAGCCCA AAAGTATAAA TAATTAACAG 
    CCCATATAGT TAAGACACTC GTCGAGCTCG TGTCCTTATT ATTAGAAAGG 
    AAACCTCTCA CAACATCAAT TTCATTGCAA CGTCACAACA TCACTTTCAA 
    GTTTCAAGTG CCGATTTAGT TTTCCTTTGG CCTGAACTTG CAAGCAATCT 
    TGAGGTCTTC CGGGGGTTTG TCCCCGGCGA ATCCAGCGTC AACCCAAGCC 
    GAGTAGCCTC CCCCCATGTT AGCCACATGG TCGTACCCCT ACGACATGAC 
    ATGTATTTTT GAATAGGTAT ACTTATTAAT TGTGTGTATG TGTGTGTATA 
    TATAGACGCA CCTCGTTAAG AAGATCAACG CAAGCACGAC TTCCTCTTTC 
    CTCAGCGTTA CAAGCCTTCA CGGTAACATA GTTAGACTAT TTAGT

AT2G21045.1

Model type
Protein coding
Short Description
Rhodanese/Cell cycle control phosphatase superfamily protein
Computational Description
Rhodanese/Cell cycle control phosphatase superfamily protein; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: sulfurtransferase 18 (TAIR:AT5G66170.3); Has 3150 Blast hits to 3144 proteins in 1047 species: Archae - 52; Bacteria - 2382; Metazoa - 28; Fungi - 31; Plants - 181; Viruses - 0; Other Eukaryotes - 476 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G21050.1

Model type
Protein coding
Short Description
like AUXIN RESISTANT 2
Curator Summary
Encodes LAX2 (LIKE AUXIN RESISTANT), a member of the AUX1 LAX family of auxin influx carriers. Required for the establishment of embryonic root cell organization.
Computational Description
like AUXIN RESISTANT 2 (LAX2); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUX1 3 (TAIR:AT1G77690.1); Has 1017 Blast hits to 1012 proteins in 134 species: Archae - 0; Bacteria - 2; Metazoa - 94; Fungi - 224; Plants - 668; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).
Link
InterPro Scan - TAIR