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GT18845

CSHL Arabidopsis genetrap mutant lines

Original: GT18845

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18845

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23128879 [Map]; Strand: c
      • AT3G62520.1 - [+] show detail - transposable element gene
        Distance: 1638; Region: intergenic
      • AT3G62528.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 2603; Region: intergenic
    Flanking Genome Sequence: GT18845 - 5-prime edge 
    CTTTCTCCCT GTTTGTAAGA TATGTGGGAT GATGTTGGCT CCTTTAAATC 
    AGCAGTGAAT GATGATCTAA CAGAAACTGA CATCAGGGTA CCAATGTAAT 
    GCCATTCTTT GTGTGGTCTG GTTATGAGAA TGCCGGAGCC ATCAATTAAT 
    TGCTTTGGTT AGGACCAGAG AAATCATGAC ATTTGTCCTC AATGTTGATT 
    CTGACCACTA CATGATCTAT AACTCCATGG CTTTGAAGTG GCAATAGAAT 
    CTGCTAAAAT GATCTCATTA TTCAAACCAC AACACTGTCT TCTTTGATGA 
    TTAGTACAAG TCTTGCATCT TATATATTTA GAGTTATATG TGTTTGGTTC 
    GGTTGATGTG TGTAACTGTG TCTATGTAAT CACACAAGTA TGAAGTATGT 
    ATGCTGTCTG GTTAGTCGGA GACGGATTAA GAAAACATGC ATCATCATAC 
    ACATGACATT GGAGAATTAT AAGGCAACAT AAAATCTTAT TTCTAAAGAC 
    TTTTTGTGAA CCAAAGTAAG GAGGAGTAGC AAGTGCACAA AAAGTACTTA 
    TAGAATCAAA TCATAAACAA CAAAAAACGC TTTTAACCTG AGCTATGTGT 
    GAATAACCTA ACTTAATCTA CAGTCTGGTT TAACTGTCTG AAGCAACACT 
    ACTATATCAC TCCTCTGTTC CGGAAATGTT TGATTCAAGC TTCAACAGAG 
    TTGAAATCCA ACTCTGCTTA TCTTCGGTAT AGTCTTCATG GCTGGTTAAA 
    ACAAACAAAA CCAATTAGGA TGAGATTGTG ATTCTG

AT3G62520.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
hAT-like transposase family (hobo/Ac/Tam3), has a 1.1e-86 P-value blast match to GB:CAA29005 ORFa of Maize Ac (hAT-element) (Zea mays)
Link
InterPro Scan - TAIR

AT3G62528.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR