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GT18854

CSHL Arabidopsis genetrap mutant lines

Original: GT18854

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18854

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 21472901 [Map]; Strand: c
      • AT1G58030.1 - [+] show detail - cationic amino acid transporter 2
        Distance: -4481; Region: intergenic
      • AT1G58037.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 64; Region: intergenic
    Flanking Genome Sequence: GT18854 - 3-prime edge 
    TTACCGACCG TTACCGACCG TTTTCATCCC TAGTAGGCAC ATTCAATTGA 
    ACAAGAGCAT AGAACAGTTG AATCTGAAGC AGCTGGATCT AAAGCACTTA 
    AATCTAAAGC AGTAGTAGCC TTAAGAAAGG AAGAGAAAAT GCAACGCTTT 
    CCACAAACTA CACAAAAAGG TCTAGTCATA CCAACATTGG CAACTACTTC 
    AGCTTTGCCG TATCTATTGC CTGGCTTGAA GTAATACATG TCTCCAAGTA 
    CACAGTTGAT ATGGAGTGTA TTCCCACAAT CATCACATCC ATAAAACCAT 
    ACACTCGGAT CTGTTTTTCC CTCACAAATA TCACACCACA ATTGACCGCT 
    GGAGTTTTCA GCTCCATGAT GCAACGATAA AAAATGATCG TCGCATCTGT 
    GTTTTATTTT TCTTGGTAAA AGTGGCACAC TCCATGCCTA AAGCAAACTC 
    ACAAACAATA C

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 21472809 [Map]; Strand: c
      • AT1G58030.1 - [+] show detail - cationic amino acid transporter 2
        Distance: -4389; Region: intergenic
      • AT1G58037.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 156; Region: intergenic
    Flanking Genome Sequence: GT18854 - 5-prime edge 
    GAACGCGGCC CTTACCGAGA TGCCGAGCCG AAGTGGTATT ATGAAAGTCA 
    ACGTTGAGGA TGTTTGAAAG GTCCACATGA CACTAAAAAG TGCCAAAACG 
    GGGGAGTGGG GAACTCTCGA AACTCCTATC TTCAGAAAAC GAGAAGTTAT 
    ATTGCTTCAT AGCTTCTTTT ATCTTTACCT TTTCTTTCTT ATTTTTTATT 
    CGGATTTTTA TGTGAAGTGT TGTGATTCTT CGACGATCTT CCGTAATTTG 
    GATTCTAATC CTATCTGAAC TTGTATGATA ACATAGATTT TCTTCCATAT 
    AATACATTTT TCTTTTTCTT CAATATAATA CACTGT

AT1G58030.1

Model type
Protein coding
Short Description
cationic amino acid transporter 2
Curator Summary
Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Localized to the tonoplast.
Computational Description
cationic amino acid transporter 2 (CAT2); FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 3 (TAIR:AT5G36940.1); Has 37076 Blast hits to 34712 proteins in 2307 species: Archae - 552; Bacteria - 29543; Metazoa - 2357; Fungi - 2838; Plants - 508; Viruses - 0; Other Eukaryotes - 1278 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G58037.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular signaling pathway; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G45730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR