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GT18858

CSHL Arabidopsis genetrap mutant lines

Original: GT18858

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18858

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24807795 [Map]; Strand: w
      • AT5G61730.1 - [+] show detail - ABC2 homolog 11
        Distance: 0; Region: exon1 (CDS)
      • AT5G61740.1 - [+] show detail - ABC2 homolog 14
        Distance: -689; Region: promoter
    Flanking Genome Sequence: GT18858 - 5-prime edge
    ACTTTCTCCC TGCTTTGGAA GTTCCTCTAT AGAGAAGATG AGAAGGATGA 
    AGAAGAACGA AGAGAAGAGA TGAAGACACG TGGCTCTCTT GTTCCTCCAT
    GAAAGCAGTA GATTCTTCTT GAACAAAGCT GTGAATTGCT GATGAAAAAG
    CGGCAAGCCT TCTCGCAGAG TCATAATCAC AGAGGAAGAA GAAGATTAGA
    GGGTTTTTTT TTTTTTTAAA AAAAAAAAAA AACGTTTTTT TTTAAAAGGG
    TTTTTTTGGG GGAAACCCCT TAAAAATTTT TGAAAAAACC TTTTTTTTTT
    TTTTTTAAAA AAAAAAAAAA ATTTTTTTTT TTTTTTCCTA AAAAGGGGGG
    GAAAGGGGGA AATTTTTAAA AAGGTTTTTT CCCCGTTTTT TCCCGGGTTT
    TTTCCCCAAA AAAAAAACCC CTTTTTTTTT TTTTAAAAAA CCCCAAAAAT
    TTTTTAAAAC CCCCCCCCCC CCCCCCGGAT AAAAATGGAA AGGGTCCCCA
    AAAAATTTTT TGGCCCCTTG GGGAAAAAAT TTTTTTTCCC CCCCCCTTTT
    TAAAGGGGGG GAGGTGCCCA AATGGGTTCC CCCCGGAAAA AAAAAAAAAA
    GGGGGTTTTT GGGGTTTTCC CCCCCCTTTT TTTGTTAATT TAAAACCCCC
    CAAAAAAAAT TTTTAAAAAA AAATTTTTTT AAAAAAAA

AT5G61730.1

Model type
Protein coding
Short Description
ABC2 homolog 11
Curator Summary
member of ATH subfamily
Computational Description
ABC2 homolog 11 (ATH11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 15 (TAIR:AT5G61690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G61740.1

Model type
Protein coding
Short Description
ABC2 homolog 14
Curator Summary
member of ATH subfamily
Computational Description
ABC2 homolog 14 (ATH14); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 16 (TAIR:AT5G61700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR