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GT18868

CSHL Arabidopsis genetrap mutant lines

Original: GT18868

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18868

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 791089 [Map]; Strand: c
      • AT2G02790.1 - [+] show detail - IQ-domain 29
        Distance: 143; Region: intergenic
      • AT2G02800.2 - [+] show detail - protein kinase 2B
        Distance: 4426; Region: intergenic
    Flanking Genome Sequence: GT18868 - 5-prime edge 
    CCCTGACAGC ATCAGAGAGT AAACTGAAGA CAACATGTCA AAAGACTCAT 
    CACACCAAAC CAAAATAAAA AAACAAACCA AACCAAAACA ACATAAAAAC 
    AGAAAAAAAA AAAAAAAAAA AAAAACCTTT TAAAGGGGCC CCAAGGGGTT 
    TAAAATTTTT TTTCCCCCCT GAAAAAAAAA AAACCCCCCC CGGGGGAAAT 
    TTTTTTTTTT TTTCCCCCCC TTTTTTGGGA ACCCCCCTTT CCCCCCCCTT 
    TTTGGGAAAT TGGGGGAAAA AAAAAAGGAA AAATTTTTTT AAAAGGGGGG 
    GTATTTTGGA AAAAAAATTT CCAAAAGGGG GGGGGGGAAA TTTAGGGGTA 
    AAACCCCCCC CCCCCCCGGG CCTGGGAAAA AAAAAAAAAA ACCCCCCCGG 
    TTTTTGACCC CTTGGGGAAA AAAAAAAAAA AATTGGGGGC CTTTGGGAAA 
    ATTTTCCCCC CCCTCCCCTG GGGTTTGAAA AAAAAAAAAG GGCCCCCCTT 
    TTCCCCCTTT TT

AT2G02790.1

Model type
Protein coding
Short Description
IQ-domain 29
Computational Description
IQ-domain 29 (IQD29); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 28 (TAIR:AT1G14380.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02800.2

Model type
Protein coding
Short Description
protein kinase 2B
Curator Summary
Encodes protein kinase APK2b.
Computational Description
protein kinase 2B (APK2B); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase 2A (TAIR:AT1G14370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR